Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00105 ATGGCTCTCTCTGCCACAAAAAAACCATTGAGAAGAACACCTACTATCACATTCATCCTCCTGCTAGTACTGTGCACCACCACATCATCGGGTGCTGCTCACACTGATTTCTTGGGATCAGCCTGCCTCAAAGTTTCTCCCGCCAAATTCGTTAACTCTGTCAGTGAAGTTGTTGGTGTTATACGAACGGTTTCATCCATTTTGTCACACTTCAGCAGCGGCTTCGGCAACTTTCGTCTCTCAAACGCCATTATCGACTGTCTCGATTTACTTGACCTGTCCTCTGACGCGCTTTCCTGGTCTATCTCCGCCACTCAGAGTCCCCAAGGGAAGCATAACAGTACGGGGAACCTAAGTTCTGATTTGAGGACGTGGCTGAGTTCTGTACTTGCGAATCCAGAGACGTGCATGGAGGGATTTGAGGGTACAAATAGCATTGTGAAAGGTTTAGTATCAAGTGGTCTTGGCCAAGTGATGTCGTTGGTGAAGGAGCTTCTTGTTCAAGTGGTTCCTGCTGCTGCTGCATCGGATCAATTCTCTACCAGCAAGAGTCAATTTCCTTCATGGATTAAACCAAGGGAGAGGAAGCTGTTACAGGCAAATGGAGTCACTGCGGATGCTGTGGTGGCTGCAGATGGAACTGGAAACTACGCTAAGGTGATGGATGCGGTGCTGGCAGCACCTGACTATAGCATGAAACGCTATGTTATATACATAAAAAAAGGTGTTTATGTGGAGAATGTTGAGATCAAGAAGAAGAAATGGAACATCATGATGATTGGAGAAGGTATGGATGCTACTGTTATCACCGGTAACCGGAGCGTTGTTGATGGATGGACCACATTCCGATCAGCTACCTTTGCTGTCAGTGGCAGGGGTTTCATAGCACGAGACATTTCTTTTCAGAACACTGCAGGACCCGAGAAGCACCAAGCAGTAGCACTGAGATCAGACTCTGACCTCTCTGTATTCTACCGATGTGGGATTTTTGGTTACCAAGACAGCCTATATACTCACACCATGCGCCAATTCTTCAGAGAATGCAAAATCAGTGGCACAGTGGATTTCATCTTTGGAGATGCCACTGCTGTGTTCCAAAACTGCAGAATACTAGCTAGGAAAGGCTTACCAAGTCAAAAGAACACCATCACAGCTCAAGGTCGGAAAGATCAAAATGAACCAACTGGTTTCTCCTTCCAATTCTGCAACATCTCTGCAGATTCTGACCTTCTACCTTCAGTTAGTTCCACTGAAACATACCTTGGAAGACCCTGGAAGACTTATTCAAGAACAGTTTTCATGCAATCATACATGAGTGATGTGATAAGGCCACAAGGGTGGATAGAGTGGAATGGAAATTTTGCTTTGGATACTTTGTACTATGCTGAGTACATGAACTCAGGGCAAGGTGCAGGACTAGCTAACCGAGTGAAATGGTCAGGGTACCATGCATTGAATGATTCTAAGCAAGCTAGTAACTTCACGGTGGCTCAATTTATTGAGGGGAATCTATGGTTACCTTCCACAGGTGTAACGTACACAGCTGGATTGACAGTTTAA 1560 0.4558 MALSATKKPLRRTPTITFILLLVLCTTTSSGAAHTDFLGSACLKVSPAKFVNSVSEVVGVIRTVSSILSHFSSGFGNFRLSNAIIDCLDLLDLSSDALSWSISATQSPQGKHNSTGNLSSDLRTWLSSVLANPETCMEGFEGTNSIVKGLVSSGLGQVMSLVKELLVQVVPAAAASDQFSTSKSQFPSWIKPRERKLLQANGVTADAVVAADGTGNYAKVMDAVLAAPDYSMKRYVIYIKKGVYVENVEIKKKKWNIMMIGEGMDATVITGNRSVVDGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFFRECKISGTVDFIFGDATAVFQNCRILARKGLPSQKNTITAQGRKDQNEPTGFSFQFCNISADSDLLPSVSSTETYLGRPWKTYSRTVFMQSYMSDVIRPQGWIEWNGNFALDTLYYAEYMNSGQGAGLANRVKWSGYHALNDSKQASNFTVAQFIEGNLWLPSTGVTYTAGLTV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00105 519 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Sebi133g00105 519 Pfam Pectinesterase 206 503 IPR000070 GO:0030599|GO:0042545
Sebi133g00105 519 Pfam Plant invertase/pectin methylesterase inhibitor 38 153 IPR006501 GO:0004857
Sebi133g00105 519 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 161 IPR035513 -
Sebi133g00105 519 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 170 IPR035513 -
Sebi133g00105 519 PANTHER PECTINESTERASE 42 507 - -
Sebi133g00105 519 Gene3D - 200 517 IPR012334 -
Sebi133g00105 519 FunFam Pectinesterase 200 517 - -
Sebi133g00105 519 SMART PMEI_2 33 168 IPR006501 GO:0004857
Sebi133g00105 519 ProSitePatterns Pectinesterase signature 1. 231 250 IPR018040 -
Sebi133g00105 519 CDD PMEI-like_4 15 171 - -
Sebi133g00105 519 SUPERFAMILY Pectin lyase-like 203 516 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00105 Sebi-Chr133 1266714 1270032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00105 18 517 Carbohydrate Esterase AT3G43270 64.384 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00105 K01051 - gmx:100814987 815.068