Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00097 ATGGCTGGTGGTTTGAACCTCGAGACAGAGCTTTTTGCAGCTTCTCATCCTGTTATGGAGGCTCCTTTTGCTCGTAATAGTAATGTTGATGGAATGAGTAACCGGAAAAGTGTTTGTGATGAAGGCTCCGTGAAGCATTTCTCTGCTAACTGGGATTCTACAAGTGTTGGTGCAAGGCCAATGCCAACATCTGGACTGAATGCAGTGACTCCTGGTACAACTCAGTTTGCCATCTGCTATAAGGGGAGTATGTGCGTCTATGATGGAATTCCTGCAAAAACGGTGCGTGAAATAATGTTGATTGCTGCTGCTGCTACCAAGTCTGCTGAAATGAAGAGAGGGATCCCCTTCACTCCACTCATTCCCACAAGCACTCCTTCTCCACAAGGAACCTCTAATAATTTGGCTTCTCAGCAGTCAGGTTGCTTTCCTGTGGAGAAGAGTTCCATGTGCAGGCTGCAAGAATTTCCAATAGCACGCAGACAGTCACTTCAAAGGTTTCTTGAGAAGCGACGAATCAGGTTGGGTAGCAAAGCCCCTTATGCCTCCTCAACAAGAGGACTAGTGGATAACATGGAAAACAACTTCTGTGATGACAATACACCAGATTTTGCTTCCTTCAACGATCAAGGGAGGGGTTTCAGCCATGTATTACTGTCTCTTAAGGGCAATTAG 675 0.4593 MAGGLNLETELFAASHPVMEAPFARNSNVDGMSNRKSVCDEGSVKHFSANWDSTSVGARPMPTSGLNAVTPGTTQFAICYKGSMCVYDGIPAKTVREIMLIAAAATKSAEMKRGIPFTPLIPTSTPSPQGTSNNLASQQSGCFPVEKSSMCRLQEFPIARRQSLQRFLEKRRIRLGSKAPYASSTRGLVDNMENNFCDDNTPDFASFNDQGRGFSHVLLSLKGN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00097 224 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 50 186 IPR040390 -
Sebi133g00097 224 SMART tify_2 69 104 IPR010399 -
Sebi133g00097 224 Pfam Jas motif 157 181 IPR018467 -
Sebi133g00097 224 Pfam tify domain 71 103 IPR010399 -
Sebi133g00097 224 ProSiteProfiles Tify domain profile. 69 104 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00097 Sebi-Chr133 1152049 1155691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00097 75 184 Tify Gene Family AT5G20900 43.103 3.19e-20 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi133g00097 tify 6.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00097 K13464 - gmx:100306655 177.178