Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00090 ATGTGCCAAACAAGCAGCAGTTCTGGGGGTATGAAGCTGCTATGGGTGTTTGGGTTTATGGGCTTGGTGGTTGTGAAATGGGTGGAAGGCTTCCAGAATGCTAGTGTGACAAACATGCAATATGTCCAAGGAGGAGGTTTCTACAACAGACCTTTGCTGGTTGGTCTTACTCTTATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCGGGTTACCACTTCCACCGTGGATATGGTTCAGGATCCAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATAAGAAATTGTATTTACAGTAAGAAAACACGTCATGGCTCATCAATATATATGGAAAAACAAATTCCATTTATTGGGATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAAATTCGCTATTGTGATGGTGCATCATTTAGTGGGGACAGTCAAAATGAGGCAGCAAAGTTGTATTTCAGAGGGCAGCGCATCTGGCAAGCTGCTATGGAAGACTTAATGTCAAAAGGGATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGAGTGTGGTCACCTTACAGGGAGTGCAAAGGAGCCTTCCAAGGAGTTGTACCATGCTTTTTCCCTCAGCACCTAATTGCCAGTGTGAGGACACCGCTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTCGCGCCACCATCTGCTGACTATCATTGGAATTGGATCGAGTGCAGAAAAAACTACGCACGTTGCAGTGCACCACAGATACAATATTTGCAAGGTTTTCGCAATCAGATGCTTAGAGTTACAAGAGGCTTCTCAAGATCTCGTCAAAACGGGCTATTCATAAACTCATGTTTTGCTCATTGCCAATCTGAGAGACAGGATACATGGTTTGCTCGTGATTCTCCTCATATTGGAAATAAAGGGATTGCAGAGTCTGTTGGGAACTGGTTTTTTGACCGAGTTGGTGTGCAGGCTATAGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAAGTGA 1095 0.4429 MCQTSSSSGGMKLLWVFGFMGLVVVKWVEGFQNASVTNMQYVQGGGFYNRPLLVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIRNCIYSKKTRHGSSIYMEKQIPFIGILSNKAEENPDFFNWNRVKIRYCDGASFSGDSQNEAAKLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGVWSPYRECKGAFQGVVPCFFPQHLIASVRTPLFLLNAAYDTWQIQASLAPPSADYHWNWIECRKNYARCSAPQIQYLQGFRNQMLRVTRGFSRSRQNGLFINSCFAHCQSERQDTWFARDSPHIGNKGIAESVGNWFFDRVGVQAIGCPYPCDKTCHNLVFK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00090 364 PANTHER NOTUM-RELATED 52 203 IPR004963 GO:0016787
Sebi133g00090 364 Pfam Pectinacetylesterase 209 342 IPR004963 GO:0016787
Sebi133g00090 364 Pfam Pectinacetylesterase 52 203 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00090 Sebi-Chr133 1083165 1088369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00090 53 364 Carbohydrate Esterase AT1G57590 60.274 7.85e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00090 K19882 - gmx:100791571 639.802