Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00083 ATGGAAGGTGAAGTTGCAATGAAAAAATGGCTGCAAGTTGAGGAAAGGCTAGATGATGATAAAAGTAAAACAGATACACTGAAGGGGATTGAGGAACACTTCAATAAAAATATTCTAGGACCTACTCTTCTCAGTTTGAACTTGAATAACTCAGAGCCTCCCCAAAATCAAGAGCAGCCCCTGACTCAAGACAAAAGGGAGGATGACATGGAGAAAGCAGTGCTGCCCACTTGGCAGCTGTTAAATAGCCGTGACCCTTCACCTTCAGATGGCAGCATAACAAAAGCATGTGGTTATGCTGAAAACATAGGCAGAAGAAACCTTACATATGCTTACAATAATGTTGAAGTTGAAGGTAAAATCAATAACCAAATAATATCACAGGAAGCAAAAATCATAGAAGATGGAGCATCTGAGGCTTCTTGCAGGAAAGCCAGAGTGTCCATAAGGGCACGGTCAGATTTTTCTTTGATGGGTGATGGGTGTCGATGGAGAAAGTATGGACAAAAGATAGCAAAGGGTAACCCTTGTCCCCGGGCCTACTATCGCTGCAACATGGGAACGGCATGTCCAGTTCGTAAGCAGGTTCAAAGATGTGCAATGGATGAGACCGTTTTCATCACAACCTATGAGGGTAATCATAATCATTCACTCCCAGCAGAAGCCAGATCCATGGCCAGCACAACATCAGCAGCATTAAACATGTTCCTTTCTGGTTCAACAACTAGTACTTTTCATAGCAGCACTCTATCAAACTCTGGCCTCTTCTCTTCCTCTTCATCATCTATTAGTTCCTCTGCCTCCACTACTTCTAGTTTGGCTTCCTTCTATCCATCTCCATCATGCCCCACTTTAACATTGGACTTAACCCACCCCTCTAATAACTACTTGAAACTCCAAAGGCCTATTTCTTCAAACCATTGGCAACCATTTCCTGTTTCATTGCATGGTCACAGTACTACTCAAACTCATGAGGGAGGACTGCAGTACCTGTCTTCTAAGCTTCCAACCGTGACACCCTCAGAAAAAAACCTTGCCTTGGTGGATGTTATCAGTGCAGCTATAATGAAGGATCCTTCTATTAAGGTAGTGTTAGATGCAGTAGTTTCCTCACTCAGTGGAGACATCACCCAACTTAGTAGGATCGAGTGA 1152 0.4323 MEGEVAMKKWLQVEERLDDDKSKTDTLKGIEEHFNKNILGPTLLSLNLNNSEPPQNQEQPLTQDKREDDMEKAVLPTWQLLNSRDPSPSDGSITKACGYAENIGRRNLTYAYNNVEVEGKINNQIISQEAKIIEDGASEASCRKARVSIRARSDFSLMGDGCRWRKYGQKIAKGNPCPRAYYRCNMGTACPVRKQVQRCAMDETVFITTYEGNHNHSLPAEARSMASTTSAALNMFLSGSTTSTFHSSTLSNSGLFSSSSSSISSSASTTSSLASFYPSPSCPTLTLDLTHPSNNYLKLQRPISSNHWQPFPVSLHGHSTTQTHEGGLQYLSSKLPTVTPSEKNLALVDVISAAIMKDPSIKVVLDAVVSSLSGDITQLSRIE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00083 383 Gene3D WRKY domain 142 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi133g00083 383 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi133g00083 383 MobiDBLite consensus disorder prediction 46 68 - -
Sebi133g00083 383 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi133g00083 383 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi133g00083 383 SUPERFAMILY WRKY DNA-binding domain 151 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi133g00083 383 MobiDBLite consensus disorder prediction 46 60 - -
Sebi133g00083 383 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 72 374 IPR044810 GO:0003700
Sebi133g00083 383 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00083 Sebi-Chr133 1000956 1005894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00083 130 290 WRKY Transcription Factor Family AT4G04450 59.006 2.64e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi133g00083 WRKY 1.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00083 - - gmx:100797109 330.102