Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00078 ATGGAGGATGAGGTGGTGTTGTTAGATTTCGGTGTCAGTATGTTTGGGATGAGAGTGAGGGTTGCACTAGCAGAAAAAGGGATCAAGTATGAGTACAAGGAGGAGGATCTGATGAACGCCAAGAGTGCATTGCTTCTCCAAATGAACCCCGTTCACAAGAAAATCCCAGTCCTTATCCATAATGGAAAGCCCATTTGTGAATCCCTCATTATTGTTGAGTATATTGATGAGGTCTGGAAGGATAAAGCTCCCCTGTTGCCCATTGATCCATACCAGAGAGCTCAAGCCAGGTTCTGGGCTGATTTTGTTGATAACAAGGTGCATGAAGTTGCAAAGAAGATATGGACTGGGAAGGTAGATGAAGTTGAGACAGAAAAGAAGGAATTAATAGAGAATTTGAAGCAATTGGAGGAGTTTCTTGGGGACAAGCCATACTTTGGGGGTGGCACATTTGGGTTTCTTGATGTTGCTTTCATTCCTTTCTATAAATGGTTTTATGCTTATGAGACAGTTGGCAAATTGAAGTTAGACTGCCCAAAACTCATTGCATGGGGAAAGAGATGCTTGCAGAGAGAAAGTGTGTCCAAATTCCTTCCAGACGAAAAGGAGATATATGAGTTTGTTCTGAGCTTCAGGAAAATAATTGGAGTGGACCAAGACACCAAAACCAACTGA 675 0.4237 MEDEVVLLDFGVSMFGMRVRVALAEKGIKYEYKEEDLMNAKSALLLQMNPVHKKIPVLIHNGKPICESLIIVEYIDEVWKDKAPLLPIDPYQRAQARFWADFVDNKVHEVAKKIWTGKVDEVETEKKELIENLKQLEEFLGDKPYFGGGTFGFLDVAFIPFYKWFYAYETVGKLKLDCPKLIAWGKRCLQRESVSKFLPDEKEIYEFVLSFRKIIGVDQDTKTN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00078 224 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Sebi133g00078 224 Coils Coil 112 139 - -
Sebi133g00078 224 Pfam Glutathione S-transferase, C-terminal domain 125 184 - -
Sebi133g00078 224 FunFam Tau class glutathione S-transferase 1 88 - -
Sebi133g00078 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 206 IPR045073 -
Sebi133g00078 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 211 IPR010987 -
Sebi133g00078 224 Gene3D - 89 218 - -
Sebi133g00078 224 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Sebi133g00078 224 Gene3D Glutaredoxin 1 88 - -
Sebi133g00078 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Sebi133g00078 224 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Sebi133g00078 224 CDD GST_N_Tau 5 79 - -
Sebi133g00078 224 SFLD Glutathione Transferase (cytosolic) 2 218 IPR040079 -
Sebi133g00078 224 CDD GST_C_Tau 90 211 IPR045074 GO:0004364|GO:0006749
Sebi133g00078 224 FunFam Glutathione S-transferase U20 89 218 - -
Sebi133g00078 224 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00078 Sebi-Chr133 976466 977342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00078 1 218 Glutathione S-transferase Gene Family AT1G17180 63.182 1.38e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00078 K00799 - gmx:100781460 359.377