Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi133g00068 | ATGGAAGGGGATATCAGTTTGGATGAAGATGCTGCTAAGAGTCTTCAACCAGTTGTAGATCCTGACAGCAAGCAAGATTCAAAGACAAGCAAGGCCAAAGATGAAACCACCAAAACAGTACCTTTATACAAGCTTTTCTCATTTGCTGATTCTTTGGATCATTTATTGATGTTTGTGGGGACTGTGGGTGCTATTGGGAATGGAATCTCCATGCCCTTGATGACTTTAATATTTGGAAATATGATCAATGCATTTGGAGGATCCACAAACACCAAAGAAGTTGTTGATGAAGTTTCCAAGGAAACTAATACTGGAGAGGTTATTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTAGGACAGTTCATACAGTTAGTGGCAACTTTCTTTGGAGGTTTTGTCATAGCATTCATTAAGGGATGGCTTCTAACTGTTGTCATGCTATCTTGTATTCCACTTCTTGTCTTGTCTGGTGCTATGATGAGCATGGTTATTACAAAAGCATCATCCAGTGGACAAGCAGCTTATTCTACAGCAGCAAGTGTAGTAGAGCAAACAATTGGTTCAATCCGAACTGTTGCATCGTTCACTGGGGAGAAGCAAGCTATAGCTAAATATAATCAGTCCTTAATTAAAGCTTACAAGACTGTAGTGCAAGAGGCAATAGCTTCTGGTTTGGGATTTGGTTCACTCTATTTTGTTGTTATTGCCAGTTATGCTTTAGCCATATGGTTTGGTGGGAAAATGATAATAGAGAAAGGATATACAGGAGGGGAGGTTGTGACTGTCTCTTGGGCAGGCATCTCCAAGCTTGAGTGCTTTGCTGCAGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATTAAAAGGAAGCCAGAAATTGATGCTTATGACACTACTGGTCGGCAACTTGATGATATTCGTGGAGATATAGAACTAAGGGACGTTTGCTTTAGTTATCCTACAAGACCAGATGAACTCATATTCAATGGATTTTCTCTTTCAATACCAAGTGGTGCTACTGCAGCCTTGGTAGGGCAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACAGGCTGGTGAAGTTCTCATTGATGGTATCAACCTTAAAGAATTTCAACTGAAATGGATCAGACAGAAGATAGGCCTGGTTAGCCAGGAACCAGTTCTCTTTACTTGTAGCATTAAAGAAAATATTGCCTATGGAAAGGATGGTGCAACTGATGAAGAAATTAGAGCTGCAGCAGAACTTGCTAATGCTGCCAAATTTATAGATAAACTTCCTCAGGGACTAGACACAATGGTTGGTGAGCATGGAACTCAACTCTCTGGTGGTCAAAAGCAGAGAGTTGCAATAGCAAGAGCAATTTTGAAAGACCCTAGAATCCTACTTCTGGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAATTGTACAAGAGGCATTGGACAGAATAATGATAAACCGAACAACTGTCATTGTAGCCCACCGCTTAAGTACTATAAGGAATGCTGATACCATTGCTGTAATTCATCAAGGAAAAATAGTTGAAAAAGGTTCACATGCTGAGCTCACCAGGGATCCTGATGGAGCCTATAGCCAGCTCATTAGACTGCAAGAAATGAAAGGGTCAGAACAGAAAGTTGTAAATGACACAGAGAAGCCAGAAAGTATAACACTTTCTGGAAGACAATCAAGTCAAAGATCATTTTCCTTACGATCTATAAGCCATGAGTCATCTGGAGTTGGAAACAGTGGTCGTCTTTCATTCTCAGCATCATATGGTGTACCCACAACAGTTGCCATTTTGGAACCTACAAGTGAAGGACCTCCTTCAACAGCTTCTTCACCACCAGAAGTGCCACTTTATCGCCTGGCTTATTTAAATAAGCCTGAAATTCCAGTCTTACTGATAGGCACTATAGCTGCAGTGGCACATGGAGTGATCTTACCCATTTTTGGGCTCTTACTTTCCAAAATGATAAGTATTTTCTATGAGCCAGCTGATGAACTTCGTGACGATTCAAGGGTTTGGGCATTAGTATTTGTTGGGTTTGCTGTGGCATCATTACTCATTTTTCCATGTAGATTCTACTTTTTTGGCATTGCTGGTGGTAAGTTGATCAAGAGGATCCGGAAAATGTGTTTTGAGAAATTAGTTCACATGGAAGTGAGTTGGTTTGATGAAGCTGAGCATTCAAGTGGAGCACTTGGAGCAAGGCTCTCTACTGATGCAGCTTCTGTTAGAGCTTTGGTTGGGGATGCACTTGGTTTGCTAGTTGAAAATATTGCTACAGCAATAGCTGGATTGGTAATTGCTTTTGTAGCCAGCTGGCAGCTTGCTCTTATAATCCTTGCTTTGGTGCCTCTATTAGGACTAAATGGATATTTACAAGTGAAGTTCTTGAAAGGGTTCAGCGCTGATTCAAAGAAATTGTATGAGGAAGCAAGTCAAGTGGCAAATGATGCTGTAGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAGGTGATGGAATTATATCAGGAAAAATTTTATGCATGCAGTTTTTATGCAGGAGCTCGTCTTGTAGAGGATGGAAAAACAACAATGACAGATGTTTTCCGTGTCTTTTTTGCTCTTAGCATGGCAGCTATAGGAATGTCTCAATCTGGGACCTTGGTTCCTGATTCAACTAAAGCAAAAAGTGCTGCTGCTTCCATATTTACTATTCTTGATCGGAAGTCACAAATAGACCCTAGTGATGAATCTGGAATGACATTGGAAGAAGTCAAGGGAGAAATTGAGTTTAAGCATGTCAGTTTCAAGTATCCTACCAGACCTGATGTTCAAATATTCAGAGATCTTTGCTTGACCATTCATAGTGGCAAGACAGTTGCACTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATCTCATTAATACAAAGATTTTATAACCCAGACTCAGGTAACATTACACTGGAAGGAGTAGAAATCCAAAGGCTGCAAGTGAAATGGCTAAGACAACAAATGGGCCTGGTAAGCCAAGAGCCTGTGTTGTTTAATGAAACCATCAGAGCTAATATTGCATATGGAAAAGGAGGAGATGCAACAGAGGCAGAAATTATAGCTGCAGCAGAACTAGCAAATGCTCACAAGTTCATTAGTAGTTTGCAAAAGGGTTATGACACAATAGTAGGGGAGAGAGGAGTTCAATTATCTGGGGGACAGAAGCAACGGGTGGCAATTGCACGAGCCATAGTGAAGAATCCAAAAATATTACTACTTGATGAAGCCACTAGTGCACTTGATGCTGAGTCTGAAAAAGTTGTTCAGGATGCACTTGACCGTGTTATGGTAGACCGAACCACAATAGTTGTGGCTCATAGATTATCCACTATTAAGGGTGCAGATTTAATTGCAGTAGTTAAGAATGGTGTTATTGCAGAGAAAGGAAAGCATGAAGCATTACTCCGTAAGGGAGGTGACTATGCTTCCTTAGTAGCATTGCACACTAGTGCTTCTTCATCTTAG | 3576 | 0.4086 | MEGDISLDEDAAKSLQPVVDPDSKQDSKTSKAKDETTKTVPLYKLFSFADSLDHLLMFVGTVGAIGNGISMPLMTLIFGNMINAFGGSTNTKEVVDEVSKETNTGEVIGRMSGDTVLIQDAMGEKVGQFIQLVATFFGGFVIAFIKGWLLTVVMLSCIPLLVLSGAMMSMVITKASSSGQAAYSTAASVVEQTIGSIRTVASFTGEKQAIAKYNQSLIKAYKTVVQEAIASGLGFGSLYFVVIASYALAIWFGGKMIIEKGYTGGEVVTVSWAGISKLECFAAGQAAAFKMFETIKRKPEIDAYDTTGRQLDDIRGDIELRDVCFSYPTRPDELIFNGFSLSIPSGATAALVGQSGSGKSTVVSLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTIRNADTIAVIHQGKIVEKGSHAELTRDPDGAYSQLIRLQEMKGSEQKVVNDTEKPESITLSGRQSSQRSFSLRSISHESSGVGNSGRLSFSASYGVPTTVAILEPTSEGPPSTASSPPEVPLYRLAYLNKPEIPVLLIGTIAAVAHGVILPIFGLLLSKMISIFYEPADELRDDSRVWALVFVGFAVASLLIFPCRFYFFGIAGGKLIKRIRKMCFEKLVHMEVSWFDEAEHSSGALGARLSTDAASVRALVGDALGLLVENIATAIAGLVIAFVASWQLALIILALVPLLGLNGYLQVKFLKGFSADSKKLYEEASQVANDAVGSIRTVASFCAEEKVMELYQEKFYACSFYAGARLVEDGKTTMTDVFRVFFALSMAAIGMSQSGTLVPDSTKAKSAAASIFTILDRKSQIDPSDESGMTLEEVKGEIEFKHVSFKYPTRPDVQIFRDLCLTIHSGKTVALVGESGSGKSTVISLIQRFYNPDSGNITLEGVEIQRLQVKWLRQQMGLVSQEPVLFNETIRANIAYGKGGDATEAEIIAAAELANAHKFISSLQKGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVDRTTIVVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLRKGGDYASLVALHTSASSS | 1191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi133g00068 | 1191 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 947 | 1184 | IPR003439 | GO:0005524 | |
Sebi133g00068 | 1191 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 310 | 556 | IPR027417 | - | |
Sebi133g00068 | 1191 | Pfam | ABC transporter | 967 | 1115 | IPR003439 | GO:0005524 | |
Sebi133g00068 | 1191 | CDD | ABC_MTABC3_MDL1_MDL2 | 318 | 556 | - | - | |
Sebi133g00068 | 1191 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 654 | 864 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Sebi133g00068 | 1191 | Gene3D | ABC transporter type 1, transmembrane domain | 102 | 863 | IPR036640 | GO:0005524|GO:0016020 | |
Sebi133g00068 | 1191 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Sebi133g00068 | 1191 | FunFam | ABC transporter B family member 1 | 308 | 557 | - | - | |
Sebi133g00068 | 1191 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 318 | 554 | IPR003439 | GO:0005524 | |
Sebi133g00068 | 1191 | FunFam | ABC transporter B family member 1 | 937 | 1186 | - | - | |
Sebi133g00068 | 1191 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 101 | 270 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Sebi133g00068 | 1191 | ProSitePatterns | ABC transporters family signature. | 1087 | 1101 | IPR017871 | GO:0005524|GO:0016887 | |
Sebi133g00068 | 1191 | CDD | ABC_MTABC3_MDL1_MDL2 | 947 | 1182 | - | - | |
Sebi133g00068 | 1191 | MobiDBLite | consensus disorder prediction | 570 | 602 | - | - | |
Sebi133g00068 | 1191 | Pfam | ABC transporter transmembrane region | 653 | 863 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Sebi133g00068 | 1191 | Pfam | ABC transporter transmembrane region | 101 | 270 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Sebi133g00068 | 1191 | Gene3D | - | 937 | 1190 | IPR027417 | - | |
Sebi133g00068 | 1191 | Gene3D | ABC transporter type 1, transmembrane domain | 36 | 100 | IPR036640 | GO:0005524|GO:0016020 | |
Sebi133g00068 | 1191 | SUPERFAMILY | ABC transporter transmembrane region | 44 | 296 | IPR036640 | GO:0005524|GO:0016020 | |
Sebi133g00068 | 1191 | Gene3D | - | 316 | 569 | IPR027417 | - | |
Sebi133g00068 | 1191 | FunFam | ABC transporter B family member 1 | 633 | 864 | - | - | |
Sebi133g00068 | 1191 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 936 | 1184 | IPR027417 | - | |
Sebi133g00068 | 1191 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 57 | 291 | - | - | |
Sebi133g00068 | 1191 | Pfam | ABC transporter | 337 | 485 | IPR003439 | GO:0005524 | |
Sebi133g00068 | 1191 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 643 | 930 | - | - | |
Sebi133g00068 | 1191 | FunFam | ABC transporter B family member 9 | 914 | 936 | - | - | |
Sebi133g00068 | 1191 | SMART | AAA_5 | 974 | 1167 | IPR003593 | GO:0016887 | |
Sebi133g00068 | 1191 | SMART | AAA_5 | 345 | 531 | IPR003593 | GO:0016887 | |
Sebi133g00068 | 1191 | MobiDBLite | consensus disorder prediction | 560 | 602 | - | - | |
Sebi133g00068 | 1191 | ProSitePatterns | ABC transporters family signature. | 457 | 471 | IPR017871 | GO:0005524|GO:0016887 | |
Sebi133g00068 | 1191 | PANTHER | ABC TRANSPORTER B FAMILY | 99 | 559 | IPR039421 | - | |
Sebi133g00068 | 1191 | SUPERFAMILY | ABC transporter transmembrane region | 641 | 931 | IPR036640 | GO:0005524|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi133g00068 | Sebi-Chr133 | 871617 | 877075 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi133g00068 | 655 | 1191 | Calmodulin-binding Proteins | AT2G36910 | 40.244 | 8.13e-121 | 403 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi133g00068 | K05658 | - | gmx:100800293 | 1880.53 |