Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00067 ATGAATGTTGATACCATTGTTGTTATTCAGGAAGGAAAAATAGTTGAAAAAGGTTCACATGTTGAGCTCACCAGGGATCCTAATGGAGCCTATAGCCAGCTCATTAGGCTGCAAGAAATTAAGAGGCCAAAACAGAATGTTGCAAATGACACAGAGAAGATAGAAAGTATATTGCATTACGGAACTCAATCAAGTCAACTATCTCCCCTCTTGCAATTTACAACTACAAGCCAAGGGTCAACTGGAGTTGGAAACAATAATGTGCCCACAACAAATAGCTTGTTGGAACCTATACATGGAAGACCTCAAGCTCATTCTTCAACAGTTTCTTTAGCACCAGAAGTGCCACTTTATCGCCTAGCTTATTTGAACAAGCCAGAGATTCCAATCTTACTGGTGGGGACTATAGCTGCAGTGGTACATGGAGTGATCTTACCCATTTTTGGGCTATTGCTTTCCAAAATGATAAGTATTTTCTATGAGCCAGCTGATGAACTTCGTGACGATTCAAAAGTTTGGGCATTAGTAGTTTCTGCGTTTGGTGGGGCACCATTCTTCATTTTTTCATGTAGATCCTACCTTTTCGGCATTGCTGGTAGTAAGTTGATCAAAAGGATCCGGAAAATGTGTTTTGAGAAAGTAGTTCACATGGAAGTAAGTTGGTTTGATGAAGCTGAGCATTCAAGTGGAGAACTTGGAGCAAGGCTTTCAACTGATGCAGCTTCTATTCGAGCGTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAGAATATTGCTACAGCAGTAGCTGGCTTGGTAATTGCTTTTGAAGTCAACTGGCAGCTTGCTCTTATAATACTTGCTTTGGTGCCTCTATTAGCACTAAATGGATATGTGCAATTCAAGTACTTGAAAGGGTTCAGTGCAGATGCAAAGAAATTGTATGAGGAAGCAAGTCAAGTGGCAAATGATGCTGTAGGGAGTATAAGAACAGTTGCATCGTTTTGTGCTGAAGAGAAGGTGATGGAATTATACAAGAAAAAATTTTATGCATGCAGTTTTTATGCTGGAGCTCGTCTTGTAGAGGATGGAAAATCAACATTCTCTGATGTTTTACGTGTCTTTTTTGCTCTCAGTATGGCAGCTACAGGAGTGTCTCAATCTGGGTCCTTGGTTTCTGATTCAACAAAAGCAAAAAATGCTGCTGCCTCCATATTTGCTATTCTTGATCAAAAGTCACAAATAGACCCTAGTGATGAATCTGGAATAACATTGGAAGAAGTGAAGGGAGAAATTGAGTTTAACCATGTCAATTTCAAATATCCTACTAGACCTGATGTTCAAATATTCAGAGATCTTTGCTTGACCATTCATAGTGGCAAGACAATTGCACTGGTTGGAGAAAGTGGAAGTGGAAAATCAACTGTGATCTCATTACTACAGAGATTTTATGACCCAGACTCAGGTTGCATTACACTAGATGGAATAGAAATTCAAAGGCTTCAAGTGAAATGGCTAAGACAACAAATGGGCCTGGTAAGCCAAGAGCCAGTGTTGTTTAATGAAACTATCAGAGCCAATATTGCATATGGAAAAGGAGGAGATGCAACAGAGGCAGAAATTATAGCTGCAACAGAACTAGCAAATGCTCACAAGTTCATTAGTAGTTTGCAAAAGGGTTATGGCACAATAGTAGGGGAGAGAGGAGTTCAATTATCTGGGGGACAGAAGCAACAGGTGGCAATTGCACGAGCTATAGTGAAGAATCCAAAAATATTACTACTAGATGAAGCCACCAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTTCAGGATGCACTTGACCATGTTATGGTGGACCGAACCACAATTGTAGTAGCTCATAGGTTATCCAGTATTAAGGGTGCAGATTTAATTGCGGTACTTAAGAATGGTGTCATAGTAGAGAAGGGAAAGCATGAGGAATTAGTCAATAAAGGAGGTCACTATGCTTCCTTAGTAGCTTTGCACATAAGTTCTTCATAA 2004 0.4022 MNVDTIVVIQEGKIVEKGSHVELTRDPNGAYSQLIRLQEIKRPKQNVANDTEKIESILHYGTQSSQLSPLLQFTTTSQGSTGVGNNNVPTTNSLLEPIHGRPQAHSSTVSLAPEVPLYRLAYLNKPEIPILLVGTIAAVVHGVILPIFGLLLSKMISIFYEPADELRDDSKVWALVVSAFGGAPFFIFSCRSYLFGIAGSKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGELGARLSTDAASIRALVGDALGLLVQNIATAVAGLVIAFEVNWQLALIILALVPLLALNGYVQFKYLKGFSADAKKLYEEASQVANDAVGSIRTVASFCAEEKVMELYKKKFYACSFYAGARLVEDGKSTFSDVLRVFFALSMAATGVSQSGSLVSDSTKAKNAAASIFAILDQKSQIDPSDESGITLEEVKGEIEFNHVNFKYPTRPDVQIFRDLCLTIHSGKTIALVGESGSGKSTVISLLQRFYDPDSGCITLDGIEIQRLQVKWLRQQMGLVSQEPVLFNETIRANIAYGKGGDATEAEIIAATELANAHKFISSLQKGYGTIVGERGVQLSGGQKQQVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDHVMVDRTTIVVAHRLSSIKGADLIAVLKNGVIVEKGKHEELVNKGGHYASLVALHISSS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00067 667 FunFam ABC transporter B family member 1 415 664 - -
Sebi133g00067 667 FunFam ABC transporter B family member 1 111 342 - -
Sebi133g00067 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 662 IPR027417 -
Sebi133g00067 667 Gene3D - 415 662 IPR027417 -
Sebi133g00067 667 FunFam ABC transporter B family member 9 392 414 - -
Sebi133g00067 667 Gene3D ABC transporter type 1, transmembrane domain 342 414 IPR036640 GO:0005524|GO:0016020
Sebi133g00067 667 Gene3D ABC transporter type 1, transmembrane domain 54 341 IPR036640 GO:0005524|GO:0016020
Sebi133g00067 667 Gene3D - 2 51 IPR027417 -
Sebi133g00067 667 CDD ABC_MTABC3_MDL1_MDL2 425 660 - -
Sebi133g00067 667 Pfam ABC transporter 445 593 IPR003439 GO:0005524
Sebi133g00067 667 Pfam ABC transporter transmembrane region 131 341 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi133g00067 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 425 662 IPR003439 GO:0005524
Sebi133g00067 667 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 343 664 IPR039421 -
Sebi133g00067 667 SUPERFAMILY ABC transporter transmembrane region 119 409 IPR036640 GO:0005524|GO:0016020
Sebi133g00067 667 CDD ABC_6TM_Pgp_ABCB1_D2_like 121 408 - -
Sebi133g00067 667 SMART AAA_5 452 645 IPR003593 GO:0016887
Sebi133g00067 667 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 132 342 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00067 Sebi-Chr133 862735 865620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00067 4 663 Calmodulin-binding Proteins AT2G36910 37.960 3.17e-150 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00067 K05658 - gmx:100799760 985.711