Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00065 ATGGGTGGGGATATCAGTTTGGATGGAGATGTTGCAAGTCTTCAACCAGATGTAGATCCTGAGAGCAAGCAAGATTCAAAGAAGAGCAAGTCAAAAAATGAAGCCACTAACTCATTACCCTTGTACAAGCTTTTCTCATTTGCTGATCCTTTGGATCATTTATTGATGTTTGTGGGGACTGTGGGAGCTACTGGGAATGGAATCTCCATGCCCTTGATGCTTTTAATATTTGGAAATATGATTAATGCATTTGGATCCAAAACTCCAAAGAAGTTGTTGATGAAGTTTCCAAGAGACAGGCTTCAAGAATTAGAGGCTTATATCTTCAAACAATTTTTGAGGCAAGATGTGACTTTCTTTGATAAGGAAACTAGTACAGGAGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGCCGAGAAGGGATGGCTTCTAACTGTTGTCATGCTATCTTGTATTCCACTTCTCGTCTTGTCTGGTGCTATGTTGAGCTTGTCTATTACAAAAGCATCAGCCAAGGGACAAGTAGCTTATTCTACCGCTGCAAGTGTAGTAGAGCAGACAATAGGTTGTATCATTCACTGGGGAAGAAGCGAGCTTTAGCTAAATATAATCAGTCCTTGATCAAAGCTTACAAGACTGGAGTGCAAGAGGCTCTAGCTTCTGGTTTGGGGTTCAGTGCAGTCTTTTTTGTTTTTTACGCCAGTTTTGGTTTGGCAGTCTCTTGGGCAGGCATCTCCAAGCTTGAGTGCTTTGCTGCAGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATTAAAAGGAAGCCAGAAATTGATGCTTATGACACTACTGGTCGGCAACTTGATGATATTCGTGGAGATATAGAACTAAGGGACGCTGGTGAAGTTCTCATCGATGGTATCAACCTCAAAGAATTTCAACTGAAATGGATCAGACAGAAGATAGGCCTGGTTAGCCAGGAACCAGTTCTCTTTACTTGTAGCATTAAAGAAAATATTGCCTATGGCAAGGATGGTGCAACTGATGAAGAAATCAAAGCTGCAGCAGAACTTGCTAATGCTGCAAAATTTATAGATAAACTTCCTCAGGGACTAGACACAATGGTTGGTGAGCATGGAACTCAGCTCTCAGGGGGTCAAAAGCAGAGAGTTGCAATAGCAAGAGCAATTTTGAAAGACCCGAGAATCCTGCTTCTAGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAATTGTACAAGAGGCATTGGACAGAATAATGATAAACCGAACAACTGTCATTGTAGCTCACCGCTTAAGTACTATAAGGAATGCTGATACTATTGCTGTTATTCATCAAGGAAAAATAGTTGAAAAAGGTTCACATGCTGAACTCACCAAGGATCCTGATGGAGCCTATAGCCAACTCATTAGACTGCAAGAAATGAAGGGGTCAGAACAGAATGTTGCAAATGACACAGACAAGCCAGAAAGTATAATACATTCTGGAAGACAATCAAGTCAAAGATCTTTTTCCTTACGATCTATAAGCCGAGGTTCATCTGGAGTTGGAAACAGTAGTCGTCACTCATTCTCAGCATCATATGTTGTACCAACAACAGGTGGAGAAGTTGAAGCTCCTCCATCAACAATTCCTTCACCACCACCAGAAGTGTCACTTTATCGCTTGGCTTCTTTAAACAAGCCTGAGATTCTAGTCTTACTAATGGGGACTATAGCTGCAGTATTACATGGAGTAATAACACCAATTTTTGGGCTCTTACTTTCCAAAATGATAAGTATTTTCTATGAGCCTGCTCATGAGCTTCGTCATGATTCAAAAGTTTGGGCAATAGTATTTGTGGCGCTTGGTGTCGCGGCATTACTCATTATTCCATGTAGATTCTACTTTTTTGGTGTTGCTGGTGCTTCTATTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTAGTTCAAAATATTGCTACAGCAATAGCTGGCTTGGTAATTGCTTTTGAAGCCAGTTGGCAGCTAGCTTTTATAATCCTTGCTTTGGCTCCTCTATTAGGACTAAATGGATATTTACAATTAAAGCTCTTGAAAGGGTTCAGCGCAGATGCAAAGAAAATGTATGAGGAAGCAAGTCAAGTGGCAAATGATGCTGTAGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAGGTGATGGAGCTATACCAGGAAAAATTTTATGCATGCAGTTTTTATGCTGGAGCTCGTCTTGTAGAGGATGGAAAAACAACAATGACAGATGTTTTCCGTGTACGTCTTTTTGCTCTGAGCATGGCAGCTATGGGAATCTCTCATTCCGGGTCCTTGGTCCCTGATTCATCAAATGCAAAAGGTGCTGCTGCTTCCATATTTGCTATTCTTGATCGGAAGTCACTAATAGACCCCAGTGATGAATCTGGAATCACATTGGAAGAAGTCAAGGGAGAAATTGAGCTTAAACATGTCAGTTTCAAGTATCCTACCAGACCTGATGTTCAAATATTCAGAGATCTTTGCTTGACCATTCATAGTGGCAAGACAGTTGCACTGGTTGGAGAAAGTGGAAGTGGCAAATCAACAGTGATCTCATTATTACAAAGATTTTATGACCCAGACTCAGGTCACATTACACTGGATGGAAAAGAAATTCAAAGGCTACAAGTGAAATGGCTAAGACAACAGATGGGCCTGGTAAGCCAAGAGCCCGTGCTGTTTAACGACACCATCCGAGCCAATATTGCATATGGAAAAGAAGGAGATGCAACAGAAGCAGAAATTATAGCTGCAGCAGAACTGGCAAATGCTCACCAGTTCATTAGTAGTCTGCAAAAGGGTTATGACACAATAGTAGGGGAACGAGGAGTTCAATTATCTGGGGGACAGAAGCAACGGGTGGCAATTGCACGAGCTATAGTGAAGAATCCAAAAATATTACTACTAGATGAAGCCACCAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTTCAGGATGCACTTGACCGTATTATGGTCGACCGAACCACAATAGTAGTGGCTCATAGGTTATCGACCATTAAGGGTGCAGATTTAATTGCAGTAGTTAAGAATGGGGTCATAGCAGAGAAGGGAAAGCATGAAGCATTACTCCATAAGGGAGGTCACTATGCTTCCTTAGTAGCATTGCACACTAGTGCTTCTTCATTGTAG 3225 0.4167 MGGDISLDGDVASLQPDVDPESKQDSKKSKSKNEATNSLPLYKLFSFADPLDHLLMFVGTVGATGNGISMPLMLLIFGNMINAFGSKTPKKLLMKFPRDRLQELEAYIFKQFLRQDVTFFDKETSTGEVVGRMSGDTVLIQDAMGREGMASNCCHAILYSTSRLVWCYVELVYYKSISQGTSSLFYRCKCSRADNRLYHSLGKKRALAKYNQSLIKAYKTGVQEALASGLGFSAVFFVFYASFGLAVSWAGISKLECFAAGQAAAFKMFETIKRKPEIDAYDTTGRQLDDIRGDIELRDAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIKAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTIRNADTIAVIHQGKIVEKGSHAELTKDPDGAYSQLIRLQEMKGSEQNVANDTDKPESIIHSGRQSSQRSFSLRSISRGSSGVGNSSRHSFSASYVVPTTGGEVEAPPSTIPSPPPEVSLYRLASLNKPEILVLLMGTIAAVLHGVITPIFGLLLSKMISIFYEPAHELRHDSKVWAIVFVALGVAALLIIPCRFYFFGVAGASIRALVGDALGLLVQNIATAIAGLVIAFEASWQLAFIILALAPLLGLNGYLQLKLLKGFSADAKKMYEEASQVANDAVGSIRTVASFCAEEKVMELYQEKFYACSFYAGARLVEDGKTTMTDVFRVRLFALSMAAMGISHSGSLVPDSSNAKGAAASIFAILDRKSLIDPSDESGITLEEVKGEIELKHVSFKYPTRPDVQIFRDLCLTIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGKEIQRLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGDATEAEIIAAAELANAHQFISSLQKGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRIMVDRTTIVVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLHKGGHYASLVALHTSASSL 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00065 1074 PANTHER ABC TRANSPORTER B FAMILY 20 147 IPR039421 -
Sebi133g00065 1074 ProSitePatterns ABC transporters family signature. 970 984 IPR017871 GO:0005524|GO:0016887
Sebi133g00065 1074 Pfam ABC transporter 299 411 IPR003439 GO:0005524
Sebi133g00065 1074 ProSitePatterns ABC transporters family signature. 383 397 IPR017871 GO:0005524|GO:0016887
Sebi133g00065 1074 MobiDBLite consensus disorder prediction 487 532 - -
Sebi133g00065 1074 MobiDBLite consensus disorder prediction 1 34 - -
Sebi133g00065 1074 Gene3D ABC transporter type 1, transmembrane domain 747 1070 IPR036640 GO:0005524|GO:0016020
Sebi133g00065 1074 FunFam ABC transporter B family member 9 797 819 - -
Sebi133g00065 1074 SUPERFAMILY ABC transporter transmembrane region 564 814 IPR036640 GO:0005524|GO:0016020
Sebi133g00065 1074 SUPERFAMILY ABC transporter transmembrane region 44 252 IPR036640 GO:0005524|GO:0016020
Sebi133g00065 1074 Pfam ABC transporter 850 998 IPR003439 GO:0005524
Sebi133g00065 1074 Gene3D - 302 483 IPR027417 -
Sebi133g00065 1074 Gene3D - 820 1069 IPR027417 -
Sebi133g00065 1074 FunFam ABC transporter B family member 1 820 1069 - -
Sebi133g00065 1074 Gene3D ABC transporter type 1, transmembrane domain 57 301 IPR036640 GO:0005524|GO:0016020
Sebi133g00065 1074 Gene3D ABC transporter type 1, transmembrane domain 545 646 IPR036640 GO:0005524|GO:0016020
Sebi133g00065 1074 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 247 480 IPR003439 GO:0005524
Sebi133g00065 1074 FunFam ABC transporter B family member 28 295 484 - -
Sebi133g00065 1074 CDD ABC_MTABC3_MDL1_MDL2 830 1065 - -
Sebi133g00065 1074 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 646 746 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi133g00065 1074 SMART AAA_5 857 1050 IPR003593 GO:0016887
Sebi133g00065 1074 SMART AAA_5 326 457 IPR003593 GO:0016887
Sebi133g00065 1074 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 830 1067 IPR003439 GO:0005524
Sebi133g00065 1074 CDD ABC_6TM_Pgp_ABCB1_D2_like 566 813 - -
Sebi133g00065 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 819 1067 IPR027417 -
Sebi133g00065 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 299 482 IPR027417 -
Sebi133g00065 1074 Pfam ABC transporter transmembrane region 646 746 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi133g00065 1074 Pfam ABC transporter transmembrane region 104 145 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi133g00065 1074 Gene3D ABC transporter type 1, transmembrane domain 647 745 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00065 Sebi-Chr133 842678 848136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00065 543 1071 Calmodulin-binding Proteins AT2G36910 36.557 7.17e-113 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00065 K05658 - gmx:100800293 1412.9