Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00061 ATGAAGGGCCTGGCTACAAGGAAAGTTATAGCTATCTGTCAGTCAGGAGGTGAGTTTGTGAGCAATAAAGATGGGTCATTGTCATACAATGGAGGGGAAGCCTATGCCATAGACATTGATCACCAGACAAGTTTGAGTGATTTTAAGTCAGAAATAGCAGAAATGTTCAGCTGCAATGTAAATACCATGATCATCAAGTACTTCCTTCCTGGCAACAAGAAAACACTCATTACTGTATCAAAAGACAAGGATTTGCAACGCATGGTCAGTTTCCTAGGGGATGCTAGCACCGTGATGTCTTCGTTATGTCAGAGGAAGGAGCAGCTCGAAATACATCCAACATGCCTGGTAGTAGGTAGTTGTTCACAAGTTCTATCAAGTAGGACAACTGTGTCAGAAGCCATTGTTCCTGTTGTTGCCCCTATTGATGTCATGGTGATGCTGCCAATCCATTGA 456 0.4298 MKGLATRKVIAICQSGGEFVSNKDGSLSYNGGEAYAIDIDHQTSLSDFKSEIAEMFSCNVNTMIIKYFLPGNKKTLITVSKDKDLQRMVSFLGDASTVMSSLCQRKEQLEIHPTCLVVGSCSQVLSSRTTVSEAIVPVVAPIDVMVMLPIH 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00061 151 PANTHER OS05G0427100 PROTEIN-RELATED 12 89 - -
Sebi133g00061 151 Pfam PB1 domain 24 95 IPR000270 GO:0005515
Sebi133g00061 151 Gene3D - 28 103 - -
Sebi133g00061 151 SMART PB1_new 22 114 IPR000270 GO:0005515
Sebi133g00061 151 SUPERFAMILY CAD & PB1 domains 24 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00061 Sebi-Chr133 822176 823041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00061 12 89 MAP Kinase Kinase Kinase AT2G35050 35.000 3.19e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00061 - - vra:106769211 194.897