Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00058 ATGGTGATAATAAACCTTGGGAAGAAGAAGAACCAGAGGGAGGGAACACGACTTGGGAAATACGAATTGGGTAGGACTCTTGGTGAAGGTAATTTTGGCAAAGTCAAGTTCGCCAGGAACACTGATTCTGGTCAATCTTTTGCCATTAAGATCATTGAGAAGAACAAAATCATCGATCTCAATATCACTAACCAGATAAAGAGGGAAATATCTGCCTTAAAGCTCCTCAGGCATCCCAATGTTGTTAAATTATACGAGGTCTTGGCTAGCAAAACAAAAATCTATATGGTACTTGAGTACGTGACTGGGGAGGAGTTATTTGATAAAATTGCATCCAAGGGTAAATTTACTGAAAGTGAAGGTAGAAAGCTGTTTCAACAATTGATTGATGGTGTGAGCTATTGCCATAGTAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTGCTTGTGGATACCAAAGGGAATATAAAGATAACTGATTTTGGCCTTAGTGCTTTACCTCAGCAATTTGGGGGAGATGGATTGCTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCAGAGATTCTTGCTAATAGGGGCTATCACGGTGCAACATCAGATGTATGGTCATGTGGTGTTGTCTTATTTGTAATCTTAACAGGATACCTACCTTTTGATGATAGAAATCTTGCAGTTCTCTATCAAAAGATTTTAAAAGGAGATGCTCAGATACCAAAATGGTTATCACCTGGTGCACAAAACATTATAAAGAGGATTCTTGATCCCAACCCTAAAACCAGGACAACAATGGCTGGGATCAAAGAAGATCCATGGTTTAAGCAGGGTTATACTCCAGCAGATCCAGAGGATGAGGAAGAGGACATATTTATAGATGATGAAGCCTTTTCCATCAATGAATTGCCACATGAAGCAGACTCAGGATCACCAATCCGTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCCTAGACCTCTCTGGCTTTTTTGAGAAAGAGGATGTCTCTGAGAGGAAGATAAGGTTTACATCAAATCTTTCAGCCAAAGATCTGATAGAGAAGATTGAGGACGCTGCAAAAGAAATGGAATTTAGAGTCCAGAAGAAAAATGGCAAATTGAAAGTGATGCAAGACAACAAGGCGCATAAAACTCTAGGCAGCCTCTCAGTGACAGTAGAGGTGTTTGAAATAAGCCCATCGTGGTATGTAGTGGAATTAAGGAAGTCTTATGGAGATGCCTCTGTATATAGACAGTTATGCAAGAAGTTGTTGAATGATTTGGGTGCTCCACCAAGGCATGCGCCAGTGAGCTCAGAAGTGAACTAG 1338 0.4058 MVIINLGKKKNQREGTRLGKYELGRTLGEGNFGKVKFARNTDSGQSFAIKIIEKNKIIDLNITNQIKREISALKLLRHPNVVKLYEVLASKTKIYMVLEYVTGEELFDKIASKGKFTESEGRKLFQQLIDGVSYCHSKGVFHRDLKLENVLVDTKGNIKITDFGLSALPQQFGGDGLLHTTCGSPNYVAPEILANRGYHGATSDVWSCGVVLFVILTGYLPFDDRNLAVLYQKILKGDAQIPKWLSPGAQNIIKRILDPNPKTRTTMAGIKEDPWFKQGYTPADPEDEEEDIFIDDEAFSINELPHEADSGSPIRINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSAKDLIEKIEDAAKEMEFRVQKKNGKLKVMQDNKAHKTLGSLSVTVEVFEISPSWYVVELRKSYGDASVYRQLCKKLLNDLGAPPRHAPVSSEVN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00058 445 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi133g00058 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Sebi133g00058 445 Pfam Protein kinase domain 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi133g00058 445 Pfam NAF domain 315 372 IPR004041 GO:0007165
Sebi133g00058 445 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Sebi133g00058 445 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Sebi133g00058 445 Gene3D Transferase(Phosphotransferase) domain 1 11 314 - -
Sebi133g00058 445 FunFam Non-specific serine/threonine protein kinase 313 434 - -
Sebi133g00058 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 416 - -
Sebi133g00058 445 SMART serkin_6 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi133g00058 445 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Sebi133g00058 445 Gene3D Kinase associated domain 1, KA1 315 433 - -
Sebi133g00058 445 FunFam Non-specific serine/threonine protein kinase 14 313 - -
Sebi133g00058 445 CDD CIPK_C 317 428 - -
Sebi133g00058 445 SUPERFAMILY Protein kinase-like (PK-like) 18 302 IPR011009 -
Sebi133g00058 445 Coils Coil 356 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00058 Sebi-Chr133 794338 798231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00058 84 433 CBL-interacting serine-threonine protein kinases AT3G17510 70.822 9.41e-175 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi133g00058 Pkinase 4.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00058 K07198 - gmx:100777468 723.776