Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00048 ATGGAGTTAACTCCAAGATCTTTAACCCCAAGATCTTTAACTCCAAAATCTTTGACTCCAAGATCTTTAACTCCACTAGCCTTAACTCCAAGAGGTTTAACTCCAAGGGGGATAAATCAAGGCCATGTCTTCAGCTTTGATAGAGATGCAGATTCTTTTGTGGAGGAAGATAAGGAGCTTCAGTCAAAGTGGGCTGCTATTGAGAAATTACCTACTTTCAAACGGATTAAAACTTCTTTTGTTGATGTCAGTCAGGAAGAGGGTGGAAGCAGCAGCAAAGAAGCAGATGGCAAAAGGGTGATTGATGTTACCAAGCTTGGAGCAGTGGAAAAACGTCTGTTCATTGACAGGCTCATAAAGCACATTGAGAATGATAACCTCCAACTGCTGCAGAAACTAAGAGAAAGGATGGACAGAGTCAATGTGAAGTTACCTACTGTGGAGGTAAAGTACAAGAACCTGCATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTCCCTACTTTATGGAACTCTTTTTCTAGCTTATTGTCAGGTTTCATGAAAACTATATCGTGTAATTCTCAAGGAGCAGATATAAGCATTCTGAATGATGTCAGTGGCATCATAAAGCCATCAAGGCTTACTCTTCTTCTTGGTCCACCTGGCTGTGGGAAAACGACCTTGTTAATGGCACTGGCTGGAAAACTAGAGGAATCTCTCAAGGTTTCTGGCGAAATCTCATACAATGGTTACAAACTAGATGAATTTTTTCCTCAAAAAACATCAGCTTACATAAGCCAGTATGACCTGCACGTTCCTGAGATGACAGTGAGAGAAACAATTGACTTTTCAGCACGCTGTCAGGGTGTTGGAAGCAGAGCCGATATAGTAGCTGAAGTCACCAGGAGAGAAAAAGAAGAAGGAATCATCCCTGACCCAGATATTGATACCTACATGAAGGCAATTTCAGTTGAAGGACAAAGCGAAAATCTTCAAACAGAATATGTTGTAAAGATTCTTGGACTGGATATCTGTGCTGACATTCTGGTTGGTGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGGGAGATGATTGTGGGTCCCATAAAGACTCTTTTCATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACCTTTCAAATAGTTACATGTCTGCAGCAACTGGTGCACATCACAGATGCAACTGCAGTACTTTCACTCCTTCAACCAGCACCAGAAACCTTTGAGTTGTTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCCGCAGTCAAGCAATCCAATTTTTCAATGATTGTGGTTTCTGGTGCCCAGAAAGAAAAGGAGTAGCAGACTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAGTACTGGTACCGCACAGATATTCCTTACAGATATATATCAGTGGATGAGTTCTCTCAAATCTTCAAAACAAGTTATTGGGGAAGAATGTTAGCTGCTGAGCTCTCACACCCATATGATAAATCTCAATCCCAAAAAAGTGCTTTATCATTTAGCAAGTACTCCTTGGGAAAAATGGAATTGTTTAAAGCTTGTATGAAGAGGGAGATTCTTCTCATGAAAAGGAATTCATTTATCTATGTATTCAAAACTGTACAGCTTACAATCACTGCAATCATAACAATGACAGTCTTCTTGCGTACTCAGCTGACTGTGGACTTGATAGGGGCTAACTATTTATTGGGTTCATTGTACTATACACTTGTACGCCTCATGACTAATGGAGTTGCTGAGTTGATCATGACTATTACTAGACTTCCTGTTGTTTATAAGCAGAAGGCATTCTATCTTTATCCAGCTTGGGCTTACTGTCTTCCAGCTTCCATTCTAAAGATTCCATTTTCAGTGCTTGATTCTATTGTTTGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGTTCCTCCGCCAGTTTCTTTTGCTAGTCACTCTGCACATGTCATCAACTTCCATGTGTCGTTTCCTTGCCTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTCTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTACCAAAGTGGTTGAGGTGGGGCTTTTGGCTCTCTCCAATGACATATGGGGAAATAGGAATAACACTAAATGAATTTCTTGGTCCTCGCTGGCGGAAGATCCAAAATGGAAACATCACAGTAGGAAGGGAGGTTCTTAGGGATCATGGTTTAGACTTTGATAGCAACTTCTACTGGCTATCAGTTGGAGCCCTGCTTGGTTTCACTGTACTTTTTGATTTTGGATTTATCTTGGCATTAACTTACTTAAAACAGCCTAAGCAATCTCGGGCTTTAGTCTCAAAAAAGAAGCTCTCTCAACTAAAAGGAGGAGAAAAAAGCAATGGTGTGGAACTGAAAAATAAGTCAGTTGCAGTTGATATTGGCCACACATCAAAGGAAACTCAAAGCACAGGGAAAATGGTCCTGCCCTTTGAGCCACTGTCAATAGCCTTTAAAGATGTCCAGTATTTTGTTGAAACTCCTCCGGAGATGAGAAAACATGGTTCCAATGAGAAAAAACTACAATTGCTCCGTGATATCACAGGAGCCTTTAGGCCAGGAATTCTTACTGCATTGATGGGAGTCAGTGGAGCAGGGAAGACAACTCTTATGGATGTCCTTTCAGGAAGGAAAACTGGTGGTATCATTGAAGGAGATATAAGAATTGGAGGATACCCCAAAGTGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAGCAAAATGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCAAATACTCAGCTTGGTTGCGGCTACCAATGGAGATTGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATGATATAAAGGATTGTTTAGTTGGCATCCCTGGCCAAAGTGGCTTATCTACTGAACAACGTAAAAGACTAACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATATTTATGGATGAACCTACATCAGGTTTAGATGCCCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGTAGGACTACTGTTTGCACAATACACCAACCAAGCATCGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCTGGAGGGCAGATTATTTATAATGGAATGCTAGGCCATCATTCAAGTAGACTGATTGAATATTTTCAGAGTATTCCTGGAGTTCCAAAGATCAAGGACAATTATAATCCTGCAACCTGGATGTTGGAAGCTACCTCTGCATCTGTAGAAGCAGAACTTCAAATAGATTTTGCAAAAATCTATAAGGAGTCACACCTTCACCGGGATACCCTTGAAATGGTGAGACAGTTAAGTGAACCACCACCAGGTTCAAGAGACTTACACTTCTCAACTCCCTTCCCACAAAATAACTTGGGGCAGTTCATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAACACGTTTCGTGTTCATGGTTGTTGCAGCAGTAATATTTGGGGCAGTATTTTGGCAGAAAGGAAATGAAATAAACAATCAGCAGGATTTGTTCAACGTGCTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATTACTGCTCAACGATTCTACCATATGTTGCAACTGAGCGCTCTGTCTTGTATAGAGAAAAATTTGCTGGAATGTATTCCTCCATGGCTTATTCATTTGCACAGGTGGCCATTGAAATACCATATATCCTAGTGCAATCAATTTTATATGTGGCTATCACATATCCAATGATAGTGAGCGCAAATCTCGATTTAGCTTCAGTATTATCAACTGCAATCTACACAATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCTAAAATTCCAAAATGGTGGGTCTGGTGCTACTGGATTTGCCCTACGGCTTGGTCCTTGAATGGCCTCCTAACTTCACAATATGGAGGCATGGACAAAGAGATACTGATATTTGGGGTGAAAAAATCAGTTGGATCCTTTCTGAAAGATTACTATGGGTTCCGGCATGACAGATTAAGCCTTGTGGCTGTGGTGCTCATTGCTTACCCAATTGTATATGCTTCTCTCTTTGCCTATTGCATAGGGAAAATGAATTACCAAAAGAGATAG 4293 0.4069 MELTPRSLTPRSLTPKSLTPRSLTPLALTPRGLTPRGINQGHVFSFDRDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDVSQEEGGSSSKEADGKRVIDVTKLGAVEKRLFIDRLIKHIENDNLQLLQKLRERMDRVNVKLPTVEVKYKNLHVEAECEVVQGKPLPTLWNSFSSLLSGFMKTISCNSQGADISILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLEESLKVSGEISYNGYKLDEFFPQKTSAYISQYDLHVPEMTVRETIDFSARCQGVGSRADIVAEVTRREKEEGIIPDPDIDTYMKAISVEGQSENLQTEYVVKILGLDICADILVGDALDRGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPRSQAIQFFNDCGFWCPERKGVADFLQEVISKKDQRQYWYRTDIPYRYISVDEFSQIFKTSYWGRMLAAELSHPYDKSQSQKSALSFSKYSLGKMELFKACMKREILLMKRNSFIYVFKTVQLTITAIITMTVFLRTQLTVDLIGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPASILKIPFSVLDSIVWTSVTYYVIGYSPEITRFLRQFLLLVTLHMSSTSMCRFLASVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPKWLRWGFWLSPMTYGEIGITLNEFLGPRWRKIQNGNITVGREVLRDHGLDFDSNFYWLSVGALLGFTVLFDFGFILALTYLKQPKQSRALVSKKKLSQLKGGEKSNGVELKNKSVAVDIGHTSKETQSTGKMVLPFEPLSIAFKDVQYFVETPPEMRKHGSNEKKLQLLRDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVKYSAWLRLPMEIDSVTKGKFVEEVLETIELDDIKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYNGMLGHHSSRLIEYFQSIPGVPKIKDNYNPATWMLEATSASVEAELQIDFAKIYKESHLHRDTLEMVRQLSEPPPGSRDLHFSTPFPQNNLGQFMACLWKQHLSYWRSPEYNLTRFVFMVVAAVIFGAVFWQKGNEINNQQDLFNVLGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSFAQVAIEIPYILVQSILYVAITYPMIVSANLDLASVLSTAIYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGGMDKEILIFGVKKSVGSFLKDYYGFRHDRLSLVAVVLIAYPIVYASLFAYCIGKMNYQKR 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00048 1430 Pfam ABC-transporter N-terminal 123 173 IPR029481 -
Sebi133g00048 1430 Gene3D - 183 448 IPR027417 -
Sebi133g00048 1430 Gene3D - 876 1108 IPR027417 -
Sebi133g00048 1430 Pfam ABC-2 type transporter 1071 1140 IPR043926 GO:0140359
Sebi133g00048 1430 Pfam ABC-2 type transporter 413 493 IPR043926 GO:0140359
Sebi133g00048 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 886 1095 IPR027417 -
Sebi133g00048 1430 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 862 1115 IPR003439 GO:0005524
Sebi133g00048 1430 MobiDBLite consensus disorder prediction 1 34 - -
Sebi133g00048 1430 Pfam Plant PDR ABC transporter associated 750 812 IPR013581 -
Sebi133g00048 1430 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 52 1312 - -
Sebi133g00048 1430 MobiDBLite consensus disorder prediction 1 24 - -
Sebi133g00048 1430 FunFam ABC transporter G family member 34 185 489 - -
Sebi133g00048 1430 Pfam ABC transporter 198 380 IPR003439 GO:0005524
Sebi133g00048 1430 CDD ABCG_PDR_domain1 195 437 IPR034001 -
Sebi133g00048 1430 SMART AAA_5 207 439 IPR003593 GO:0016887
Sebi133g00048 1430 SMART AAA_5 899 1091 IPR003593 GO:0016887
Sebi133g00048 1430 FunFam ABC transporter G family member 34 876 1108 - -
Sebi133g00048 1430 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 183 455 IPR003439 GO:0005524
Sebi133g00048 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 455 IPR027417 -
Sebi133g00048 1430 CDD ABCG_PDR_domain2 859 1097 IPR034003 -
Sebi133g00048 1430 Pfam ABC-2 type transporter 534 745 IPR013525 GO:0016020|GO:0140359
Sebi133g00048 1430 Pfam ABC-2 type transporter 1188 1312 IPR013525 GO:0016020|GO:0140359
Sebi133g00048 1430 Pfam ABC-2 type transporter 1313 1368 IPR013525 GO:0016020|GO:0140359
Sebi133g00048 1430 Pfam ABC transporter 890 1042 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00048 Sebi-Chr133 654221 662509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00048 887 1074 Calmodulin-binding Proteins AT2G36910 28.571 3.56e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00048 K08711 - gmx:100779615 2503.01