Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00044 ATGATGGCCGAGACCAAAAACTACATTCGGAACCAACAATTAGAGCTTGAAGAGATACTACAAGAAGCAGAGCATCGTTGGCTTCGACCTGCTGAAATATGTCAGATACTTCGCAATTATTGGAAGTTTGAATTAACAGCAGATCCACCTGTTAGGCCTCCAGCTGGATCACTTTTCTTGTTTGATCGAAAATCACTTCGTTACTTTCGCAAGGATGGTCACCGGTGGAGGAAGAAAAAAGATGGGAAGACTGTCAGAGAAGCTCATGAAAAGTTGAAGGCTGGTAGTGTGGATGTCTTGCATTGTTACTATGCTCATGGTGAAGATAATAAAAACTTTCAACGGAGAAGTTATTGGATGCTTGATGATGGTTTGTTGTTCTATTATGCCATGCTTCACACTTTACAGGGCTGCAAGTCTGGCATCTCACATTTGCCTGTAGTTCCAGTAACCCTAGTTGGTAGCTCTCGAATTAGTTCAGCGCCTTCCTCTACCAAAACAAACTCACCAATATCTGTTGTTCAAACTTCTTTGAGATCAAATGCAAATAAAGTTGATCAGAATAAGGATGTCAACTCACACAATGATCCTAGAGCCTCTTCTCATGCTCAACCTATCAGCAATTCCATACCTCACAGTGCACCTCAGCTTGCACATGAAGCCACTGGGTTTTCTGAGTTATTGAGGAACCCCGTTATTTCATCATGGACACCTTCTCTCCCTACCTTTTCTCTTGGAACTGGCTTGTCTCCCTGGGCATTAATTCAGAACTCTAGCAGAAATACCGATAATATGTATGATAAAGAACTTCATGTTGAAGGATCCATTGAAGGTCCTGAGGCAGACTTCACTGTTCATAAACTATGCGATGCAAGGTTAGATGCAGTTCGTGGTGGAAGCAAGATGGTGCAGAAGGAGCATGATTTAGGTTCACTTCACACACAATTACATGATCATACTGATCATCCAGTTGTTGCAACTACTACAATCCTAGTTAAAGATGATGGTAATGACAAAGGTGAGTCAGAACAAGTTGAATCTGGGGGATTGAAGAAGCTCGATAGTTTTGGAAGGTGGATGGATAAGGAGATTGGTGGAGACTATGATAATTCCTTGATGGCTTCAGATTCTGGCAATTATTGGGGTACACTCGATGCTCATAATGAGGATAAGGAGGTGTCTAGTTTACGCCACATGCAGTTGGATATGGATTCATTAGGCCCTTCTCTTTCCCAAGAGCAATTATTCAGTATCCATGACTTTTCTCCGGATTGGGCAATTCTGGGATTAGAACAAAGTAAAAAGCTTTCGAGTGAGACCAAATGGGGATGCATGTTTGGTGAAATAGAGGTTTCTGCTGAAGTTTTGACAGAGAATGTCATACGGTGTCAGACTCCTTTGCATTCACCTGGCCGCATTCCATTCTATGTTACCTGCAGTAATAGGTTAGCCTGCAGCGAGGTCAGAGAATTTGAATATCATGAAAATCCTACTAAATTTATAAGTTCTGTGGGTATTAAAGTCTCACCAGAAGATGAGGTACAACTTCAATTGCGACTTCTTAAACTAGTAGAATTGGGACCTGACAAGAAGTTGTTGAAGTGCTCTTATCCTGAATGTGAGAGATGTAAACTTAAGGGAACAATGTATTCCATGAGAGATGATAGTGGCGTATTTGAAGAAACTTTTCAGATTAATAGAAGTGATCAGATAAACCCTAGAGATGTATTATTTCAGAGATTAATCAGAGACAAGCTTTATGAATGGTTGGTGTTTAAGGTTCATGAAGAAGAAAAAGGACTACATGTGTTGGATAATGAAGGCCAAGGAGTAATTCATTTGGCAGCTTCTCTTGGTTATGTGTGGGCTTTGGGCCCATTAGTTGCTGCTGGTATCAGTCCTAACTTCAGAGATGCACATGGAAGAACAGGACTTCACTGGGCATCATACTTTGGGAGAGAAGAAACTGTGATTGCGCTAGTCAAATTAGGTGCAGCCCCAGGTGCTGTTGAGGATCCCACATCAGCATTTCCTCGAGGAAAAACAGCAGCTGATTTAGCTTCAAGAAGAGGACATAAAGGCATTGCTGGGTATTTGGCTGAGTCAGATCTAACAAGTCAGTTATCTATATTGACTGTAAATGAAAATGATATGTACAGCATTGCCACAACCACAGCAGCTGACAGTGCTTTTGAGGCTGCTGAAGGTGACTCATCTAATATGACAATGGATGAGCAACACTGTCTGAAGCAGTCACTTGCTGCTTTTCGAAAATCAGCTCATGCAGCTGCTTCAATCCAAGCAGTCTTTAGAGCAAGATCATTCTGTCAGAGACAATTAGCCAAAGGCAGCAGTGATATTTCTGAAACAGTACATGACCTAGTTGCTGATTCTATGAACAAGGTTCAGAAGATGGGTCACTTTGAGGATTATTTACATTTTGCTGCTTTAAGGATTCAAAAGAGATATCGTGGGTGGAAAGGAAGAAAAGATTTTTTGAAAATACGCAACCGCATAGTAAAAATTCAGGCTCATTTTAGAGGGCACCGAGTTCGGAAGCAGTACAAAAAAGTTGTCTGGTCTGTTAGCGTTGTGGAAAAGGCAATACTGCGTTGGAGACGGAAGGAGCTGGTCTGCGAGGATTCCGGGTTGGGCAGCCTGTTGGCATTGTGGCAAAAGATGCTGAGAAAAGTGATGAGTATGATTTTCTTAGCATTGGGCGGAGACAGAAATCAGATGATAAAGAAAGCTCTGGATAGAGTTAAGTCCATGGTTCGTCAGAGGCACGGGATCAATATATGA 2802 0.4176 MMAETKNYIRNQQLELEEILQEAEHRWLRPAEICQILRNYWKFELTADPPVRPPAGSLFLFDRKSLRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNKNFQRRSYWMLDDGLLFYYAMLHTLQGCKSGISHLPVVPVTLVGSSRISSAPSSTKTNSPISVVQTSLRSNANKVDQNKDVNSHNDPRASSHAQPISNSIPHSAPQLAHEATGFSELLRNPVISSWTPSLPTFSLGTGLSPWALIQNSSRNTDNMYDKELHVEGSIEGPEADFTVHKLCDARLDAVRGGSKMVQKEHDLGSLHTQLHDHTDHPVVATTTILVKDDGNDKGESEQVESGGLKKLDSFGRWMDKEIGGDYDNSLMASDSGNYWGTLDAHNEDKEVSSLRHMQLDMDSLGPSLSQEQLFSIHDFSPDWAILGLEQSKKLSSETKWGCMFGEIEVSAEVLTENVIRCQTPLHSPGRIPFYVTCSNRLACSEVREFEYHENPTKFISSVGIKVSPEDEVQLQLRLLKLVELGPDKKLLKCSYPECERCKLKGTMYSMRDDSGVFEETFQINRSDQINPRDVLFQRLIRDKLYEWLVFKVHEEEKGLHVLDNEGQGVIHLAASLGYVWALGPLVAAGISPNFRDAHGRTGLHWASYFGREETVIALVKLGAAPGAVEDPTSAFPRGKTAADLASRRGHKGIAGYLAESDLTSQLSILTVNENDMYSIATTTAADSAFEAAEGDSSNMTMDEQHCLKQSLAAFRKSAHAAASIQAVFRARSFCQRQLAKGSSDISETVHDLVADSMNKVQKMGHFEDYLHFAALRIQKRYRGWKGRKDFLKIRNRIVKIQAHFRGHRVRKQYKKVVWSVSVVEKAILRWRRKELVCEDSGLGSLLALWQKMLRKVMSMIFLALGGDRNQMIKKALDRVKSMVRQRHGINI 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00044 933 ProSiteProfiles CG-1 DNA-binding domain profile. 16 143 IPR005559 GO:0003677
Sebi133g00044 933 ProSiteProfiles Ankyrin repeat profile. 640 672 IPR002110 GO:0005515
Sebi133g00044 933 SMART CG_1_2 19 263 IPR005559 GO:0003677
Sebi133g00044 933 SUPERFAMILY Ankyrin repeat 597 701 IPR036770 -
Sebi133g00044 933 SUPERFAMILY E set domains 418 493 IPR014756 -
Sebi133g00044 933 ProSiteProfiles IQ motif profile. 812 841 IPR000048 GO:0005515
Sebi133g00044 933 MobiDBLite consensus disorder prediction 197 215 - -
Sebi133g00044 933 Gene3D - 584 704 IPR036770 -
Sebi133g00044 933 SMART ANK_2a 640 669 IPR002110 GO:0005515
Sebi133g00044 933 SMART ANK_2a 679 710 IPR002110 GO:0005515
Sebi133g00044 933 FunFam Calmodulin-binding transcription activator 2 811 859 - -
Sebi133g00044 933 Pfam IQ calmodulin-binding motif 838 856 IPR000048 GO:0005515
Sebi133g00044 933 Pfam IQ calmodulin-binding motif 815 832 IPR000048 GO:0005515
Sebi133g00044 933 Gene3D Immunoglobulins 411 499 IPR013783 -
Sebi133g00044 933 ProSiteProfiles IQ motif profile. 835 863 IPR000048 GO:0005515
Sebi133g00044 933 ProSiteProfiles Ankyrin repeat region circular profile. 640 665 - -
Sebi133g00044 933 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 16 928 - -
Sebi133g00044 933 SMART iq_5 834 856 IPR000048 GO:0005515
Sebi133g00044 933 SMART iq_5 811 833 IPR000048 GO:0005515
Sebi133g00044 933 SMART iq_5 758 782 IPR000048 GO:0005515
Sebi133g00044 933 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 863 IPR027417 -
Sebi133g00044 933 Pfam CG-1 domain 22 124 IPR005559 GO:0003677
Sebi133g00044 933 MobiDBLite consensus disorder prediction 179 215 - -
Sebi133g00044 933 Coils Coil 2 22 - -
Sebi133g00044 933 Gene3D - 810 859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00044 Sebi-Chr133 598995 606627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00044 349 926 CAMTA Transcription Factor Family AT2G22300 39.268 7.96e-128 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Sebi133g00044 CG-1 3.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00044 K21596 - gmx:100818336 1337.4