Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00024 ATGGATGTAAAAGGAAGAAGAAGCAACACCACCTCCACCATCCTTCAGACTAGTAGTGATGAGGAGGAGATGGAGCTCCGAAGAGGCCCTTGGACCGTTGATGAGGACCTCACCCTCATCAATTACATTGCCACCCATGGCGAAGGCCTCAAACGCACAGGAAAGAGTTGCAGATTGAGATGGTCGAAAATTGCCCAGTATTTACCGGGAAGAACTGACAATGAGATAAAGAACTATTGGAGAACGCGTGTGCAAAAGCTTGCCAAACAACTCAAATGTGACGTGAATAGCAAGCAATTCAAGGACACCATGCGTTACCTTTGGATGCCAAGGCTAGTAGAGCGCATTCAAGCAGCCAACACCAACACCTCCACTTCTCCAACTTCCATAACCGTTTCCGCGAATCACGCATCCATCTATAACGGAAAAATGGAGTTAACTCCGGCAGTTATAAACGGTGATTTTGCGGTTACGCAAAGTTATACCCCAGAGAACAGCAGCACAGGCGCCGCATCATCATCAGATTCGTTTGGGACTCAACTCTCAGATTTAACTGATTATTACAGCGTCCCCGTTAATAGTAACGGTAACCCTAACAATAATGCTGCTGCTGCAGAACATAATTGTTATTATCAACCTTCTCAACTTAGCTACTCCGATTGCATCACTCAGGGAATGGAATATTTCCAAGGCGTGGAGCCAAACACGCCGTGGATGCAAAGTGGAGACTCCTCCGATAATTTTTGGAACGTTGAAAATATGTTGTTTTTACAGCAGCAACTCATGAATGATAATTAA 798 0.4511 MDVKGRRSNTTSTILQTSSDEEEMELRRGPWTVDEDLTLINYIATHGEGLKRTGKSCRLRWSKIAQYLPGRTDNEIKNYWRTRVQKLAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAANTNTSTSPTSITVSANHASIYNGKMELTPAVINGDFAVTQSYTPENSSTGAASSSDSFGTQLSDLTDYYSVPVNSNGNPNNNAAAAEHNCYYQPSQLSYSDCITQGMEYFQGVEPNTPWMQSGDSSDNFWNVENMLFLQQQLMNDN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00024 265 MobiDBLite consensus disorder prediction 1 21 - -
Sebi133g00024 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 88 IPR017930 -
Sebi133g00024 265 SUPERFAMILY Homeodomain-like 24 85 IPR009057 -
Sebi133g00024 265 Gene3D - 30 84 - -
Sebi133g00024 265 SMART sant 27 86 IPR001005 -
Sebi133g00024 265 ProSiteProfiles Myb-like domain profile. 23 84 IPR001005 -
Sebi133g00024 265 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 22 61 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sebi133g00024 265 CDD SANT 30 82 IPR001005 -
Sebi133g00024 265 MobiDBLite consensus disorder prediction 1 19 - -
Sebi133g00024 265 Pfam Myb-like DNA-binding domain 28 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00024 Sebi-Chr133 305788 307377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00024 1 265 MYB Transcription Factor Family AT5G49620 37.870 3.16e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi133g00024 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00024 K09422 - gmx:100791349 313.153