Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00019 ATGTCCATTTTAGCTATGAATATGAATATTCTGTTTGTGCAGTCTCTATGTTTCTTTGTTTTAACTAGTTCATTCATTAAAGCATCAGAAATAAATGTTGAAAGCTATGAATCTGATAGAATAATCGATCTTCCTGGGCTACCTTCAACCCCATCAGTTTCACACTTTTCAGGTTACATCACAGTCAATGAAGACCATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTAAATCTCAACCCTCCAACAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCCGGATGCTCCTCTATTGGGTATGGTGCAGTTGTTGAGATAGGACCTCTTTTAGTCAACAAAAATGGTGAAGGACTATCTTTCAACACATACTCTTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTTTCTTACACAAACACATCTTCTGATCTCACCATATTAGAGGATCATTTTGTGGATTCCCTCAGTTCAAATCCCGGGACTTTTATATATCAGGAGAAAGCTAGGACACTATATCCCTCAGCTTGCAGAGTAGGGAATCCAGAAACTGAAGATTACTATGACTATAAAGGCCTTTTGGAATATGCATGGAGCCATGCAGTAATATCAGACCAGCAATATGACAAAGCAAAACAAGTTTGTGACTTTAAACAAATGGAATGGTCTAATGAATGCAATCAGGCCATGAATGAAGTCTTTCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCTTCATGTCATCTAAATAGCACATCATCAGTAGCTCTTGATAGTGAGAGTAATGGCCCTGAATCACTCACAAAGATAGATGTTCAATCATCTTTTCATGTAAATACTAAAAGAGGAAACAACACTAATCTAACATGGAAGGTTTGCAATGATTCCATATTGCGGACTTATAACTTCTCTGTTTTTTCGGTCCTACCCATTTACACCAAACTCATCAAGGGTGGACTTAAGATATGGGTTTACAGTGGAGATGCAGATGGCAGAGTACCAGTGATAGGGACACGATATTGCATTGATGCTCTTGGATTACCCCTCAAGTCTAGTTGGCGGACATGGTATCATCATAATCAGGTTGGAGGAAGGATAGTGGAATATGAAGGGCTAACATATGTGACAGTGAGAGGAGCTGGTCATTTGGTGCCTCTCAATAAACCCAGTGAAGCTCTTTCTCTAATTCATGCTTTCCTAACAGGCGACCATCTCCCAACTCGTCCATAA 1260 0.3984 MSILAMNMNILFVQSLCFFVLTSSFIKASEINVESYESDRIIDLPGLPSTPSVSHFSGYITVNEDHGRALFYWFFEAKSQPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLLVNKNGEGLSFNTYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDHFVDSLSSNPGTFIYQEKARTLYPSACRVGNPETEDYYDYKGLLEYAWSHAVISDQQYDKAKQVCDFKQMEWSNECNQAMNEVFQDYSEIDIYNIYAPSCHLNSTSSVALDSESNGPESLTKIDVQSSFHVNTKRGNNTNLTWKVCNDSILRTYNFSVFSVLPIYTKLIKGGLKIWVYSGDADGRVPVIGTRYCIDALGLPLKSSWRTWYHHNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHAFLTGDHLPTRP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00019 419 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 151 IPR001563 GO:0004185|GO:0006508
Sebi133g00019 419 ProSitePatterns Serine carboxypeptidases, histidine active site. 382 399 IPR033124 GO:0004185
Sebi133g00019 419 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Sebi133g00019 419 PRINTS Carboxypeptidase C serine protease (S10) family signature 382 395 IPR001563 GO:0004185|GO:0006508
Sebi133g00019 419 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Sebi133g00019 419 SUPERFAMILY alpha/beta-Hydrolases 37 416 IPR029058 -
Sebi133g00019 419 Gene3D alpha/beta hydrolase 168 267 IPR029058 -
Sebi133g00019 419 Gene3D alpha/beta hydrolase 33 166 IPR029058 -
Sebi133g00019 419 Pfam Serine carboxypeptidase 45 153 IPR001563 GO:0004185|GO:0006508
Sebi133g00019 419 Pfam Serine carboxypeptidase 183 411 IPR001563 GO:0004185|GO:0006508
Sebi133g00019 419 Gene3D - 276 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00019 Sebi-Chr133 239757 243535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00019 300 415 Calmodulin-binding Proteins AT2G22960 31.624 1.53e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00019 K16297 - gmx:100815141 670.233