Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00006 ATGGCCATGCAACTAGTGCTATTGTTTCTAGTTATACTCAAGCTCACTTCAGCATTTGCAACCACATTAAACGATGCATATGGTGGTGATACTGGCTGTCCATTAGGGACTGGCATATACCAATACACTTGCCCAGAAGCTGAGGCCATCATCTTCTCTTGGGTGGAACAGGCAGTCTCTCAAGACTCAAGAATGGCTGCCTCACTGCTTAGGCTACATTTTCATGATTGCTTTGTCAATGCAAGACATTCTTTGCCTGCACATGGTTGTGATGCTTCAGTCCTGCTGGATGACACACAAGACTTTGTTGGTGAGAAAACTGCAGGTCCAAACTTGAATTCACTCAGAGGATTTGAAGTAATCGACCAAATCAAATCTGAACTGGAACTAGTGTGTCCGCAAACTGTCTCTTGTGCTGACATACTGGCTTCTGTTGCTCGAGATTCAGTGCTTCTGTCAGGAGGTCCAACATGGGAGGTGCAAATGGGAAGAAAAGATGGTATGACTGCTAGCAAGGAAGCTGCAAATAATAACATCCCAGCCCCAAACTCAACTGTTGATGTGCTCACAGCAAAGTTTGAGAATAGTAGCAGTGACTCAGATAATCAATATGTTAATATTGATTTCATTGCATCATTGCAACAGTTGTGCTCAGGAACAGATATTAACAACCGAGTTGCACATCTTGACCTGGCCACTCCAGCTACGTTCGATAACCAATACTATATTAATCTTCTCTCTGGCGAGGGTTTGCTTCAATCAGACCAGGCTCTGGTGAAAGGGAATGATCAGACACGACAGATTGTCGAAACTTATGTGGAGAATCCATTCGCTTTCTTTGAGGACTTCAAAGACTCAATGTTGAAAATGGGAAGCTTGGGATCACTTACTCAGAGTAACGGCGAGATTCGTAGGGACTGCCGCACTATTAATTAA 936 0.437 MAMQLVLLFLVILKLTSAFATTLNDAYGGDTGCPLGTGIYQYTCPEAEAIIFSWVEQAVSQDSRMAASLLRLHFHDCFVNARHSLPAHGCDASVLLDDTQDFVGEKTAGPNLNSLRGFEVIDQIKSELELVCPQTVSCADILASVARDSVLLSGGPTWEVQMGRKDGMTASKEAANNNIPAPNSTVDVLTAKFENSSSDSDNQYVNIDFIASLQQLCSGTDINNRVAHLDLATPATFDNQYYINLLSGEGLLQSDQALVKGNDQTRQIVETYVENPFAFFEDFKDSMLKMGSLGSLTQSNGEIRRDCRTIN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00006 311 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Sebi133g00006 311 Gene3D - 35 197 - -
Sebi133g00006 311 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 SUPERFAMILY Heme-dependent peroxidases 35 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 ProSiteProfiles Plant heme peroxidase family profile. 34 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 Pfam Peroxidase 212 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 Pfam Peroxidase 55 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi133g00006 311 FunFam Peroxidase 38 192 - -
Sebi133g00006 311 CDD secretory_peroxidase 35 308 IPR033905 GO:0004601|GO:0042744
Sebi133g00006 311 Gene3D - 291 311 - -
Sebi133g00006 311 Gene3D Peroxidase, domain 2 202 290 - -
Sebi133g00006 311 PANTHER PEROXIDASE 72-RELATED 35 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00006 Sebi-Chr133 141112 142408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00006 29 311 Peroxidase AT4G16270 54.489 1.30e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00006 K00430 - gmx:100787637 489.189