Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi132g00116 ATGGCTGGTCCTTTTGACAAGGTCTCCGCAATTCATCCTGGGAAAGAATCTTGGAGGTTGAGAGTGAGGGTCGTTCGTTTGTGGGAAATGTGTTCCATTGTTGATCCTACGAATCCTTTTGCCATTGATATGGTTTTGTTGGATGTTGAGGGTGGTAAGATCCAGGCCACAATTCGGAAGCCAATGATGAAGAAGTTTAGGAATGTAATTTCTGAGGGTGAAGTTTACACAATGTTGAATTTCGCTGTTATTAAAAATGTTGGAAGTTACCGTGCCTGTAGACATGAGTTTAAACTTCTGTTTAGTGCAAAGACTAAGGTATTCCCTGCCCAATCTGATGTGATACCTACTGTGGGTTTATCTCTTATGACCACTGAGCAGATTGCAAAGACCAATGGAGAGTCAAATTACTTATTTGACCTGATGGGTATACTGACAGCTGTTTCTGCTGAGAAAGTTGTTGAAACTGATGGGAGGAAAACTAGAATGATGGAAATGGAGCTGATGGATGACAATGATTATATAGTTGGCAGGTGTTACCCGTTACCTGTCGTTGTTGTTCAACTTTTCAAAGTCAGATTGTATAAGGGTAATGTTGTGCTTCAGAATGTTAATAATACTTCAAGGATTATGTGGAATCCTGATACTTCTGATGCCAATGAGTTTAGGAATGGGAAGGTCAATGGTGGTATGGAGCTTGCAAGTGTCACAAATCAGTGA 720 0.4056 MAGPFDKVSAIHPGKESWRLRVRVVRLWEMCSIVDPTNPFAIDMVLLDVEGGKIQATIRKPMMKKFRNVISEGEVYTMLNFAVIKNVGSYRACRHEFKLLFSAKTKVFPAQSDVIPTVGLSLMTTEQIAKTNGESNYLFDLMGILTAVSAEKVVETDGRKTRMMEMELMDDNDYIVGRCYPLPVVVVQLFKVRLYKGNVVLQNVNNTSRIMWNPDTSDANEFRNGKVNGGMELASVTNQ 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi132g00116 239 Gene3D - 4 109 IPR012340 -
Sebi132g00116 239 Gene3D - 114 232 IPR012340 -
Sebi132g00116 239 SUPERFAMILY Nucleic acid-binding proteins 121 224 IPR012340 -
Sebi132g00116 239 SUPERFAMILY Nucleic acid-binding proteins 4 111 IPR012340 -
Sebi132g00116 239 Pfam Domain of unknown function DUF223 44 113 IPR003871 -
Sebi132g00116 239 CDD RPA1_DBD_A_like 19 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi132g00116 Sebi-Chr132 1622034 1623744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi132g00116 8 237 Core DNA Replication Machinery Family AT2G06510 21.569 1.00e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi132g00116 - - lja:Lj0g3v0341019.1 197.978