Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi132g00079 ATGCAGCAGGACCAAGAGGAACATGTGGTGTGCAGAGATAGTAATAATTACATGCAAATCATCAAGGGGAAGCGCACAAAGCGTCAAAGGCTACCATCCCCACTTAGATTAGCCATGTCAACATCTTCAAGAAGCAGCACTACTGAAAATTCAGGAGGATTTGATCATGCTACAACCTCAAATGTTGATGAATTCAAGAACAGGACAGAAGAAGAGGAGGATATGGCTAATTGTTTGATTCTATTGGCACAAGGCAATCATACCCAGAAAAAAGCATCAAATTCATCACAACAACATGTAGCTGCATCTAACAAAAAAGCAGGGCTTTTTCTTTACCAGTGCAAGACTTGTAACAGATGTTTCCCTTCATTCCAAGCACTTGGTGGGCACAGAGCAAGTCACAAGAAACCAAAGGCAAATACAGAAGAAAAACAAACAGTTAATACTAGTTTTGTGAATGATTATGCTACAACAATATCTATGAATAGTGATCATGGGAGCCCTGAAATCCAAGAAGCCAAGAAACCCAGAAATGTTTTGAAGTTGGACTTGAATCTTCCTGCTGCACCTGAGGATGATAACAGAGAATCAAAGTTTCCGTTTCAGTCCAAAGAAAAAGTTATTGTCTTCTCTGCAACGTCCTTGGTGGATTGTCATTACTAA 663 0.3982 MQQDQEEHVVCRDSNNYMQIIKGKRTKRQRLPSPLRLAMSTSSRSSTTENSGGFDHATTSNVDEFKNRTEEEEDMANCLILLAQGNHTQKKASNSSQQHVAASNKKAGLFLYQCKTCNRCFPSFQALGGHRASHKKPKANTEEKQTVNTSFVNDYATTISMNSDHGSPEIQEAKKPRNVLKLDLNLPAAPEDDNRESKFPFQSKEKVIVFSATSLVDCHY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi132g00079 220 MobiDBLite consensus disorder prediction 22 61 - -
Sebi132g00079 220 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Sebi132g00079 220 PANTHER ZINC FINGER PROTEIN ZAT5 44 145 - -
Sebi132g00079 220 SUPERFAMILY beta-beta-alpha zinc fingers 111 138 IPR036236 -
Sebi132g00079 220 MobiDBLite consensus disorder prediction 35 60 - -
Sebi132g00079 220 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
Sebi132g00079 220 Pfam C2H2-type zinc finger 112 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi132g00079 Sebi-Chr132 1161441 1162301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi132g00079 112 220 C2H2 Transcription Factor Family AT5G03510 33.628 2.21e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi132g00079 zf-C2H2_6 7.1e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi132g00079 - - cave:132161809 196.823