Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi132g00051 ATGGACACAGTACTGCTGGTGCCTCCTTGGCTTGAACCATTGCTACGCACACCATTCTTCAACGTGTGTCGGATTCACGCAGATGCTGCTAGGAGTGAATGTAACATGTATTGCTTAGATTGCCATGGCGATGCCTTTTGCTTTTATTGCCGTTCTTCAAGACACAAAGATCATCAAGTCATTCAGATAAGACGATCTTCTTATCACGATGTAGTGAGGGTCGCAGAAATTCAGAAGGTGTTGGACATTAGTGGAGTACAAACGTATGTGATAAACAGTGCTCGAGTTCTGTTCCTGAATGTGAGGCCTCAGCCAAAAACTGGAAAAGGGGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGATGTAAGGTGAGATGA 411 0.4477 MDTVLLVPPWLEPLLRTPFFNVCRIHADAARSECNMYCLDCHGDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNVRPQPKTGKGVAHICEICGRSLLDPFRFCSLGCKVR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi132g00051 136 Pfam PLATZ transcription factor 64 135 IPR006734 -
Sebi132g00051 136 SUPERFAMILY B-box zinc-binding domain 20 65 - -
Sebi132g00051 136 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi132g00051 Sebi-Chr132 878933 879691 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sebi132g00051 PLATZ 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi132g00051 - - qsa:O6P43_006587 263.077