Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi132g00037 ATGCTCTGTGATCCATTAGCTTATCCGTGTTCAAAAATCAATATGGCTTATGGTCTTTGTTGCCCTGGAATTTGGACGGAACTTTGCCGATTCAGTGGTGCCAAGATCTACCCAGGAAAAGGCATCAGATTTATTCGTAGTGATTCTCAGGTGTTCCTGTTTGCCAACTCAAAATGCAAAAGGTATTTCCACAACCGTTTGAAGCCATCAAAGCTCACCTGGACTGCCATGTACAGGAAGCAACACAAGAAGGACATTGCTCAAGAAGCTGTGAAAAAGAGGCGTCGTGCTACCAAGAAGCCTTACTCCAGGTCCATTGTTGGTGCTACTTTGGAAGTTATCCAGAAAAAAAGAACTGAGAAGCCAGAGGTTCGGGACGCAGCTAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAAGCAGAAGTAGCGGCTAAGTCACAAAAAGCTCAAGGCAAGGGCAATGTTGCAAAAGGTGCTATGCCCAAGGGTCCCAAAATGGGTGGTGGAGGCGGGAAACGCTGA 558 0.4588 MLCDPLAYPCSKINMAYGLCCPGIWTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVAAKSQKAQGKGNVAKGAMPKGPKMGGGGGKR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi132g00037 185 SMART 4TRASH 29 67 IPR011017 -
Sebi132g00037 185 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 27 79 - -
Sebi132g00037 185 Gene3D - 90 166 - -
Sebi132g00037 185 MobiDBLite consensus disorder prediction 139 157 - -
Sebi132g00037 185 MobiDBLite consensus disorder prediction 139 185 - -
Sebi132g00037 185 ProSitePatterns Ribosomal protein L24e signature. 31 48 IPR023442 -
Sebi132g00037 185 PANTHER 60S RIBOSOMAL PROTEIN L24 26 177 IPR000988 -
Sebi132g00037 185 Gene3D Ribosomal protein L24e 25 85 IPR038630 -
Sebi132g00037 185 Pfam Ribosomal protein L24e 26 88 IPR000988 -
Sebi132g00037 185 FunFam 60S ribosomal protein L24 24 85 - -
Sebi132g00037 185 Coils Coil 133 160 - -
Sebi132g00037 185 CDD Ribosomal_L24e_L24 26 77 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi132g00037 Sebi-Chr132 678080 680188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi132g00037 26 178 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 86.928 1.11e-84 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi132g00037 K02896 - jre:109002760 234.958