Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi131g00138 ATGGATAACATGTTCCAATTTGACCAAACAGATGATTGCTCCAATTTTTTCCCTCTCCCTTCCAGTCCCAACACTAACAACCCCAATCTCCTACTGATCGAGGCTGACACCAACCTCTGCTCCCATAAACTATCTAGCTCTGATAGCAAACCTAATGAAAACAAGAAGAGAAAGATCATGCATAGAGATATTGAAAGACAAAGAAGGCAAGAAATGGCCACTCTTCACGCTTCTCTGCGGTCACTGCTCCCTGTAGAATACTTAAAGGGAAAACGTTCAATATCAGATCACATGCACCAGGCGGTGAATTATATCAAACACCTTGGGAACAAGATCGAGGAGCTAAATAACAAGAGAGATAGGCTGCGAAAATTGTGCAATACAGGTAAAATGGAAAATTCCCAGGCAGCCAAACAGGATGTTGTTGTGACAGTTAGATCCTGTTGGATAGGAATAGAGGTTGTCATAAACACTGCACATGAAGAAGGGTTTCCTCTTTCAAGAGTGCTCCAAGCTTTAATTAGAGAAGGGTTCAGAGTTATCAATTGCAGTTCAACTAAAGTAAAAGGAAGGTTATTTCATACCATTGAATCCGAGGAGAACAATGATGGAAGAAGAATCGACCAGTCTGAGCTACAACAAAAATTGACAAGCTTAATCAGTCAATCTTAG 672 0.4077 MDNMFQFDQTDDCSNFFPLPSSPNTNNPNLLLIEADTNLCSHKLSSSDSKPNENKKRKIMHRDIERQRRQEMATLHASLRSLLPVEYLKGKRSISDHMHQAVNYIKHLGNKIEELNNKRDRLRKLCNTGKMENSQAAKQDVVVTVRSCWIGIEVVINTAHEEGFPLSRVLQALIREGFRVINCSSTKVKGRLFHTIESEENNDGRRIDQSELQQKLTSLISQS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi131g00138 223 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 56 108 IPR011598 GO:0046983
Sebi131g00138 223 Pfam Helix-loop-helix DNA-binding domain 57 108 IPR011598 GO:0046983
Sebi131g00138 223 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 55 127 IPR036638 GO:0046983
Sebi131g00138 223 Coils Coil 98 132 - -
Sebi131g00138 223 CDD bHLH_AtORG2_like 57 125 - -
Sebi131g00138 223 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 49 221 - -
Sebi131g00138 223 MobiDBLite consensus disorder prediction 42 64 - -
Sebi131g00138 223 Gene3D - 47 138 IPR036638 GO:0046983
Sebi131g00138 223 MobiDBLite consensus disorder prediction 48 64 - -
Sebi131g00138 223 FunFam Transcription factor bHLH126 48 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi131g00138 Sebi-Chr131 1772072 1773405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi131g00138 54 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 44.000 1.64e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi131g00138 HLH 2.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi131g00138 - - aprc:113851145 279.641