Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi131g00110 | ATGGCAGATGACGAAGGAAGTGCATCCAGGAAGCGAAGGACCCGAGGACCTGAGGCCACCGCCCGCAGCCAAGCCTTGGAGCGCCTCAAGGCCCGCCTTGGCGGTGGTCGCAGATCTGACCCCGACGGACCCCAAATCAGGTTAGAAAACCCTATCTATGATACAGTTCCCGAGGACGAGTACAACGCCCTCGTTGCCAAGCGCCGCGAACAAGCACGCTCCTTCATCGTCGACGATGACGGTCTCGGTTACGGTGACGGAGGCGAGGAAGAGGATTGGTCCAAAGCTGGCTTCACCCTCTCCTCCGACGAATCCGACGGCGAATCGACGAAGCCCAAGCGGAAGAAAGATCCTCAGCCCAAACGGCAATCTTCTTCCTCTTCTGCGCTCTCAGCCGCCGCCGCCATGATGGGCGCGCAGAGGTTGTCGTCCATGTTTACTTCCGCAGTTTTCAAGAAAAGCAGGGACGATAAGGCCTGTGACAGCATCGTCGATGATGTTATCGCGGAGTTCGCGCCGGATGAGACCGATAGACTGAGTCGGAGAAGGCTTCAAGTGGATTCGTCGTCTGGCGCCAACGACGCTCAACGGATTAAGCCATCTGTTGGTGATTCTATCAGAGGTTCTTCGTTGTCCAAAGCTTTTGCAAATGGTGACGCTGAACCGGTTAGGGTTTTTCAGAACAATGGATGCGACTTGGGATTAGAGCAAAAGTGCGAAGCGGAAGTGAATGAAAATGTAAGTTCGGAAAATGGCCAGGTACCAGTAGAGCAATCTAATGACTGCCCAAGTAATGAGGATTTAGTTGAGGAGAAAGTGGCGAAGGACGTTGAAATAGAAGTGAAACAAGATGCGAAAAAGGAAGTGTTCACTTTGAATGCCAAAGTTACAAAAGAGGAGGAGGATCCAGCATTGTGTGCGACTGCTGGTTGGCAAGCAGCGAAGAGTGGTGCCGGCGGAGGAGTGGAGATCAACGCTGCTGATTCGAAGGATGCTTCACATAGCCAACAACACACGGAGTTTAATCTTGAGACAGATGGATCGCTGCCTTTCTACATACTAGATGCCCACGAGGAGTTTTATGGAGCCAATATGGGAACTCTATATTTGTTTGGGAAGGTCAAAACAGGGAATTTGTATCAGAGTTGCTGTGTTGTTGTGAAGAACATGGAGAGGTGTGTATATGCAATTCCAAGTCGCCCTTTGCATTACACTGATGAGATGGTGAATCTTGAGAAAGATGTCCAAGAGTCTCGAATTTCTCCTCAAGATTTCCGTAAAAAGCTGCATGATATGGTATCTGATATAAAGAATGAGATAGCAAAACATCTGGTGGATCTGAGCGTTTCTACCTTTAGCATGGCACCTGTTAAGAGGAAATATGCATTTGAACGGTCTGAAATTCCTACCGGTGAAAATTATGTGGTGAAAATAAATTACCCATTCAAGGATCCAGTACTTCCAGTAGACCTCAAAGGAGAAAGTTTCTGTGCTCTCCTAGGAACTCGTTGCAGTGCACTCGAGCTTTTTCTGATTAAAAGAAAGATAAAGGGGCCTTCATGGCTACAGGTTTCAAACTTTTCTACCCGCTCAGCTTCTCAAAGGGTTAGCTGGTGCAAATTTGAAGTGACTGTCGACTCTCCTAAAGACATAAGGATTTCTTCAAATTCCTCAAAATTCACTTTCGAGATTCCTCCTGTGGTTGTCACGGCGATAAACTTGAAAACCACCATAAATGAAAAGCAGAACATAAATGAAATTGTATCAGCATCAGTTGTCTGTTGCAATATGGTTAAGATTGACACTCCTATGTTGGCTTCAGAGTGGAAGAGACCTGGAATGCTGACCCATTTTACTGTTATTCGTAAGCTTGATGGGAATATATTTCCACTGGGATTCAGTAAGGAGGCTACGGACAGAAACATAAAAGCTGGGTCAAATGTTCTGTGTGTTGAAAGCAGTGAAAGAGCTTTGTTAAATCGTTTGATGTTAGAATTACACAAGTTGGATAGTGATGTTCTTGTTGGACATAATATTTCTGGATTTGACCTGGATGTTCTTCTCCACAGATCCCAGAAGTCTTCTGCATTCTATCCGATTAGCATTTTACACTTTGAAGGACCTGCAGCACCTAAAACACCCAATAAAAAACTTGTGCAGGCTTGCAAAGTACCAAGCAGCATGTGGTCTAAACTAGGCCGCCTCAACCGTTCTACAATGCCTAAACTTGATAGAAGAAGCAAAGTTTTTGGTTCTGGAGCTGATCCTGGTATCATGTCTTGCATTGCTGGTCGGCTTCTTTGTGATACATATTTGTGTTCTCGTGACCTATTAAAGGAGGTTAGTTATGCTTTAACTCACCTCGCAAAAACACAGCTGAACAAGTTTCGGAAGGAAGTTGCTCCACATGACGTTCCAAAAATGTTCCAAACAACAAAATCCCTAATGGAGCTTATTCAATATGGTGAAACGGATGCCTGGTTGTCTATGGAACTCATGTTTCATCTGAGTGTTCTCCCGCTCACACGTCAGCTGACTAATATAAGTGGTAATTTGTGGGGAAAAACTCTTCAGGGTGCTCGGGCACAGAGAGTGGAATATTTATTATTGCATGCTTTCCATGCAAAGAAATATATTGTGCCAGACAAGTTTACAAATCATGCAAAAGAAACAAAATTGACCAAACGCAGAGTACATGGTGTTGATGATAGCAACTTTGATGAAGCAGAAATTGATGATGCAAACTACAATAATGATGCTTCTGAACGTGATTATAAGAAAAACAAAAAGGCTTCTTCCTATGCTGGGGGTCTGGTTTTAGAGCCAAAGAAGGGTCTATATGACAAATATATATTGCTTCTGGATTTCAATAGTCTTTATCCTTCTATCATTCAGGAATACAATATCTGCTTCACAACTGTTGAAAGATCTTCCGGCGGATCTTTTCCTCGTCTACCATCTAGTAAAATAACTGGAGTCTTGCCAGAGTTGCTGAAAAATCTGGTGGAAAGGAGGAGAAAGGTAAAGTCATGGATGAAGACTGCATCTGGTCTTAAAGTTCAGCAGCTGGACATTCAGCAGCAAGCACTGAAGCTTACTGCAAACAGCATGTATGGATGCCTGGGATTTTCCAATTCAAGATTTTATGCGAAACCACTAGCCGAGCTCATAACCCAACAAGGAAGGGAGATATTGCAGAGTACTGTTGATCTTGTTCAAAATAACTTGAATTTAGAGGTTATTTCTACTGCACTGCATTTTGAAGTGATCTATGGTGATACTGATTCAATAATGATTTACAGTGGACTAGATGATATTGCGAAAGCAAAGGCAATGGCTGGGAAAGTTATTCAAGAGGTCAATAAGAAATATAGATGCTTGGAAATTGATCTTGATGGTTTATATAAGAGGATGCTACTTCTCAAGAAAAAGAAATATGCAGCTGTAAAGGTGCAGTTTAAAGATGGCACCCCATATGAGGTTATTGAACGTAAAGGTCTTGACATTGTTCGTCGTGACTGGAGCTTATTGGCTAAAGAATTAGGAGATTTTTGCTTGACTCAAATTTTGTCAGGAGGGTCATGTGAAGATGTTGTTGAATCAATTCACAGCTCTCTCATGAAGGTGCAAGAAGAAATGAGGAACGGAGAAGTACCATTGGAAAAATATGTCATCACAAAGACATTAACTAAACCTCCTGATGCATATCCTGATGCCAAAAACCAGCCCCATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACTCCTCTGGTTGCTCTGTTGGTGATACGATCCCTTATATAATTTGCTATGAGCAGGGTGGTAGTTCAGGCAGTGCAACAGGCATTGCCCAGCGTGCTAGACATCCTGATGAACTAAAACGAGAACAAGGGACATGGCTAATTGACATTGATTACTATTTGTCACAACAGATTCATCCTGTGGTATCACGTCTTTGTGCATCAATTCAAGGCACAAGCCCAGAAAGACTGGCTGATTGTTTAGGGCTTGATGCCTCAAAGTTTCAACTTAAATCAAGTGAAGCTTCAAGTGGTGATCCTATGAGCTCACTCTTGTTTGCTGCTGATGATGAGGAGAGGTATAGGGGATGTGAGCCGTTGGTCTTGTCATGCCCCAGCTGCTCAGGAACCTTTGACTGCCCACCTGTGTTTAAATCTATTTGTTCATTGGGAAGTGAAAAGCCAACCAGCTTAGGCACCGAGGAATCTGACTACAATTTCTGGAGTAAGCTGCACTGTCCTAAATGCCCGGAAAATGGTGTTGGAAGAATATCTCCTGCAATGATAGCTAATCAGGTCAAAAGGCAAGTAGAGAAGTTTGTTTTCATGTATTATAGAGGTTTACTAATGTGTGATGATGAAACGTGTAAACATACAACGCGAAGTATCAGCCTTCGGTTGGTTGGTGATTCTGATAGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAACGGTCGTCTCTATAGAAAGTACACTGAAGCAGACTTGTACAAGCAGCTCTCATATTTTTGCCACGTGTTTGATACTGTTTGTTGTATAGAAAAGATGGAGGCAAAATCTAGGATCCCGATAGAGAAAGAATTGATCAAAATTAGACCGATGGTTGATCTTGCAGCGTCAACCGTTCAGAAGATCAGGGACCGTTGTGCTTATGGGTGGGTGAATTTCCAGGACCTGGTCGTTACAATTTAA | 4716 | 0.4347 | MADDEGSASRKRRTRGPEATARSQALERLKARLGGGRRSDPDGPQIRLENPIYDTVPEDEYNALVAKRREQARSFIVDDDGLGYGDGGEEEDWSKAGFTLSSDESDGESTKPKRKKDPQPKRQSSSSSALSAAAAMMGAQRLSSMFTSAVFKKSRDDKACDSIVDDVIAEFAPDETDRLSRRRLQVDSSSGANDAQRIKPSVGDSIRGSSLSKAFANGDAEPVRVFQNNGCDLGLEQKCEAEVNENVSSENGQVPVEQSNDCPSNEDLVEEKVAKDVEIEVKQDAKKEVFTLNAKVTKEEEDPALCATAGWQAAKSGAGGGVEINAADSKDASHSQQHTEFNLETDGSLPFYILDAHEEFYGANMGTLYLFGKVKTGNLYQSCCVVVKNMERCVYAIPSRPLHYTDEMVNLEKDVQESRISPQDFRKKLHDMVSDIKNEIAKHLVDLSVSTFSMAPVKRKYAFERSEIPTGENYVVKINYPFKDPVLPVDLKGESFCALLGTRCSALELFLIKRKIKGPSWLQVSNFSTRSASQRVSWCKFEVTVDSPKDIRISSNSSKFTFEIPPVVVTAINLKTTINEKQNINEIVSASVVCCNMVKIDTPMLASEWKRPGMLTHFTVIRKLDGNIFPLGFSKEATDRNIKAGSNVLCVESSERALLNRLMLELHKLDSDVLVGHNISGFDLDVLLHRSQKSSAFYPISILHFEGPAAPKTPNKKLVQACKVPSSMWSKLGRLNRSTMPKLDRRSKVFGSGADPGIMSCIAGRLLCDTYLCSRDLLKEVSYALTHLAKTQLNKFRKEVAPHDVPKMFQTTKSLMELIQYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTNHAKETKLTKRRVHGVDDSNFDEAEIDDANYNNDASERDYKKNKKASSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSGGSFPRLPSSKITGVLPELLKNLVERRRKVKSWMKTASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITQQGREILQSTVDLVQNNLNLEVISTALHFEVIYGDTDSIMIYSGLDDIAKAKAMAGKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGTPYEVIERKGLDIVRRDWSLLAKELGDFCLTQILSGGSCEDVVESIHSSLMKVQEEMRNGEVPLEKYVITKTLTKPPDAYPDAKNQPHVLVAQRLKQQGYSSGCSVGDTIPYIICYEQGGSSGSATGIAQRARHPDELKREQGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDASKFQLKSSEASSGDPMSSLLFAADDEERYRGCEPLVLSCPSCSGTFDCPPVFKSICSLGSEKPTSLGTEESDYNFWSKLHCPKCPENGVGRISPAMIANQVKRQVEKFVFMYYRGLLMCDDETCKHTTRSISLRLVGDSDRGTVCPNYPRCNGRLYRKYTEADLYKQLSYFCHVFDTVCCIEKMEAKSRIPIEKELIKIRPMVDLAASTVQKIRDRCAYGWVNFQDLVVTI | 1571 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi131g00110 | 1571 | Coils | Coil | 282 | 302 | - | - | |
| Sebi131g00110 | 1571 | Pfam | DNA polymerase family B, exonuclease domain | 381 | 695 | IPR006133 | - | |
| Sebi131g00110 | 1571 | ProSitePatterns | DNA polymerase family B signature. | 1091 | 1099 | IPR017964 | GO:0000166|GO:0003676 | |
| Sebi131g00110 | 1571 | Gene3D | - | 1167 | 1352 | IPR042087 | - | |
| Sebi131g00110 | 1571 | SUPERFAMILY | DNA/RNA polymerases | 877 | 1338 | IPR043502 | - | |
| Sebi131g00110 | 1571 | MobiDBLite | consensus disorder prediction | 75 | 134 | - | - | |
| Sebi131g00110 | 1571 | SMART | polmehr3 | 565 | 1103 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Sebi131g00110 | 1571 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
| Sebi131g00110 | 1571 | Pfam | DNA Polymerase alpha zinc finger | 1363 | 1567 | IPR015088 | GO:0003887|GO:0006260 | |
| Sebi131g00110 | 1571 | Gene3D | - | 716 | 905 | IPR036397 | GO:0003676 |
Showing 1 to 10 of 34 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi131g00110 | K02320 | - | gmx:100798779 | 2345.08 |
Showing 1 to 1 of 1 entries