Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi131g00109 ATGCCCGATCATCCCACTCCCACAAACATGAACGACCAGCTCTCCAACCCCACCTCCATCTTCGGCCTCCGCTTGTGGGTTGTCCTCGGCGTTTGTGTCGGTGCTGCCATCGTCCTCCTTCTCTTCCTCATCTCTATCTGGCTCGCTTTCAAGCGTTCCAAGACCAAACATTCCATTCCTGATGTCTCTAAGGAGATCCAAGAGATCAGAGTAGACCATTCCAACAACCCTCCCCTTCAACCCGACCCACTTCCTGAACCCGACCCGGTTTCAGGTAACGAGCTCCAGCTTCCGCTGGAAGATGACAATTCATTGGGTCTGGGCTACAATAGAATTCAGTTTGAGATTGGGAAGAACCATAGGATTTCGTACCCTGAACGTGCCTGTGTTAGGTCTTCTTCCCATGAAGGCAGTGGAGAGGCTCGACCCATGGATCAGGTGCCAACGGTGATTCCTCAAGTTTCTCACTTGGGTTGGGGACATTGGTATACTCTCAGGGAGCTTGAGGATGCAACCAATGGGTTCGCCCCAGAAAATGTTATTGGCGAAGGCGGTTATGGAATCGTTTATCATGGTATCTTGGAGGACAACACTAATATTGCAATTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAGAGAGTTTAAGGTTGAAGTGGAAGCTATAGGACGAGTTCGCCACAAGAATTTAGTGAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTTGTGTATGAGTACGTTGACAATGGTAACTTGGAGCAATGGCTACATGGGGATGTTGGGCCTTGCAGTCCTCTAACTTGGGAAATTCGAATGAACATTATTCTGGGAACTGCAAAAGGGTTAACTTATCTTCACGAGGGGCTAGAACCAAAAGTTGTACACCGTGATATTAAATCAAGCAACATTTTGCTTAGTAAGCAGTGGCATTCAAAGGTGTCAGATTTTGGCCTTGCCAAACTCCTTGGCCCTGAGAGCAGCTATATCACAACCCGTGTAATGGGTACATTTGGATATGTAGCTCCTGAATACGCAAGTACTGGTATGTTGAATGAACGAAGTGATGTGTATAGTTTTGGAATTCTTATAATGGAAGTAATTACAGGCAGGAATCCAGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATTTAGTTGATTGGCTCAAGAAGATGGTCAGTAACAGAAATCCAGAGGGAGTGTTGGATCCCAAGCTCCCTGAGAAACCAACTTCAAGGGCACTAAAGCGAGCCCTTCTTGTAGCCTTACGCTGCACAGACCCTAATGCACAAAAGCGACCTAAAATGGGGCATGTAATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATCGTCGAGCCAGAAAGGATACAGGACATTCACCTAACGCAAGAGTAGTAGGGGATGAATTGAAAGAAGAAGCGACTGTATCAGCTCATGATTGTAAGATTGAAAATGGGGTGGGTGCCAATGAGACAAGATCAAACCATCAAATAGAAAAGCAATAA 1524 0.46 MPDHPTPTNMNDQLSNPTSIFGLRLWVVLGVCVGAAIVLLLFLISIWLAFKRSKTKHSIPDVSKEIQEIRVDHSNNPPLQPDPLPEPDPVSGNELQLPLEDDNSLGLGYNRIQFEIGKNHRISYPERACVRSSSHEGSGEARPMDQVPTVIPQVSHLGWGHWYTLRELEDATNGFAPENVIGEGGYGIVYHGILEDNTNIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKQWHSKVSDFGLAKLLGPESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARKDTGHSPNARVVGDELKEEATVSAHDCKIENGVGANETRSNHQIEKQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi131g00109 507 CDD STKc_IRAK 181 447 - -
Sebi131g00109 507 FunFam Probable serine/threonine-protein kinase At1g01540 155 250 - -
Sebi131g00109 507 ProSiteProfiles Protein kinase domain profile. 175 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi131g00109 507 SMART serkin_6 175 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi131g00109 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Sebi131g00109 507 Gene3D Transferase(Phosphotransferase) domain 1 251 469 - -
Sebi131g00109 507 Gene3D Phosphorylase Kinase; domain 1 152 250 - -
Sebi131g00109 507 MobiDBLite consensus disorder prediction 447 507 - -
Sebi131g00109 507 SUPERFAMILY Protein kinase-like (PK-like) 150 447 IPR011009 -
Sebi131g00109 507 FunFam Putative receptor-like serine/threonine-protein kinase 251 461 - -
Sebi131g00109 507 MobiDBLite consensus disorder prediction 72 95 - -
Sebi131g00109 507 PANTHER OS01G0323000 PROTEIN 9 462 - -
Sebi131g00109 507 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524
Sebi131g00109 507 MobiDBLite consensus disorder prediction 447 485 - -
Sebi131g00109 507 Pfam Protein kinase domain 178 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi131g00109 Sebi-Chr131 1345671 1348449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi131g00109 156 495 Receptor kinase-like Gene Family AT4G02010 41.761 4.45e-86 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sebi131g00109 Pkinase 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi131g00109 - - gmx:100797440 841.647