Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi131g00104 | ATGTATGAGGACATACTCAAAACTTCACCCAGTGATGACAGCAGCATGGACATGATGGCAATGATGCAAATGGAAAAGTTCCTGAATTATGTGATCCCTTTTATAACACTACTCTCAATTACACAGACAACGAATTCTCAGGTGGAAGCTCCACCACCACCACTCTCCCTGTTTTCTCCAACGTTAACCAAAATAGAAAAAGAGTTCTATTGCTGCGATGAGAGAGATGATTTTCCGAGTAGCAGTGATGCAGCCTATTCATATGACCCGGAATCTGTTAAGCCACCAAAGAGACGGAATGTGAAAATTTCAAAGGATCCTCAGAGTGTGGCAGCGAGGCACAGGAGGGAAAGAATAAGCGAGAGAATAAGGATCCTGCAGAGATTAGTCCCTGTGGGACGAAAATGA | 408 | 0.4363 | MYEDILKTSPSDDSSMDMMAMMQMEKFLNYVIPFITLLSITQTTNSQVEAPPPPLSLFSPTLTKIEKEFYCCDERDDFPSSSDAAYSYDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPVGRK | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi131g00104 | 135 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 86 | 135 | IPR045843 | GO:0003700|GO:0006355 | |
| Sebi131g00104 | 135 | MobiDBLite | consensus disorder prediction | 76 | 99 | - | - | |
| Sebi131g00104 | 135 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 103 | 135 | IPR011598 | GO:0046983 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi131g00104 | Sebi-Chr131 | 1294876 | 1295377 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi131g00104 | 87 | 135 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G21330 | 67.347 | 1.25e-15 | 70.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi131g00104 | - | - | gmx:100805427 | 83.5741 |