Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi131g00076 ATGGAACTGAGCTTGGATTTGAGTTTGGCTTTTGTCCCCAAAACCGTTTCCCTATTTCTTGGCGACGTTTCTCGGAGCAGAGATAACTCTGAGAAACTTGCCATGCTTGAGGACTTTATCCAGAGATTGGAGGATGAAATGAGGAAGGTTGAGGCTTTCAAACGCGAGCTCCCTCTTTGCATGCTCCTCATAAACGATGCCATAGCAAAATTGAAGGAGGAAAAACTACGGTGTATTGGAATGCAAGATCCACCTGTAACTGAGGAAGAATTCATGCCGTTGAAGACTAGTTATGGAGGAAATGGAAAAGGACCTTCAACCATGGGAGAAGAAAGCTGTGACAAGAAGAATTGGATGAGCTCAGTTCAGCTATGGAACACTGGAACCAAATTGAAGGGTGGAGAAAGTGTTCAACAACTGGATCAGAAGAACGATAGTGGAGGAGCATTTATCGCATTTAATGGCAATTCATTTGTCCCCAAAGAGGTTTCAAAAGTTCCAAGCTTTAGTTTGATGAGTCCAGCTTCTGAACTGAGCCGTAGCAATTCCAAGAGTGGTTGTGGAGGTAGTAGTTCTGGCTCTTCTTTGCTTCGCGTTGAGATACAGAGTCAACCACAACCACCGCAACATCTGCAGCAGAATCCAAGGAAACAAAGGCGATGCTGGTCGCCGGAGCTTCATCGGCGTTTTGTTGACGCGCTTCAACAACTTGGTGGAGCACAAGTGGCCACTCCTAAACAGATTAGAGAACTGATGCAGGTGGAAGGCCTCACAAATGATGAAGTGAAAAGCCACTTGCAAAAGTACAGGCTTCATATTAGAAGATTCCCAGTTGACCAGACTAATAATGGCTTATGGATGGCACAAGATCAATGTGGAGATAAATCAAAGGGGAACCTATCACAGTCTGGTTCTCCACAAGGTCCTCTTACACCTCTTGTCTTGGGAGGGTCTGTTAAGGGTCTCTCAAGTCCTGGCCGAAATAGTATGGATGCAGAAGATGAGCAATCAGATTGCAGTAATTGGAAAGGTGGGATCCAGCAGCAACTAGAAGCTGATAACCAGAGCCTCTAA 1074 0.4534 MELSLDLSLAFVPKTVSLFLGDVSRSRDNSEKLAMLEDFIQRLEDEMRKVEAFKRELPLCMLLINDAIAKLKEEKLRCIGMQDPPVTEEEFMPLKTSYGGNGKGPSTMGEESCDKKNWMSSVQLWNTGTKLKGGESVQQLDQKNDSGGAFIAFNGNSFVPKEVSKVPSFSLMSPASELSRSNSKSGCGGSSSGSSLLRVEIQSQPQPPQHLQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHIRRFPVDQTNNGLWMAQDQCGDKSKGNLSQSGSPQGPLTPLVLGGSVKGLSSPGRNSMDAEDEQSDCSNWKGGIQQQLEADNQSL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi131g00076 357 MobiDBLite consensus disorder prediction 340 357 - -
Sebi131g00076 357 NCBIfam myb-like DNA-binding domain, SHAQKYF class 217 272 IPR006447 GO:0003677
Sebi131g00076 357 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 341 IPR044787 GO:0003700|GO:0006355
Sebi131g00076 357 Pfam Myb-like DNA-binding domain 219 270 IPR001005 -
Sebi131g00076 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 214 274 IPR017930 -
Sebi131g00076 357 MobiDBLite consensus disorder prediction 289 357 - -
Sebi131g00076 357 Coils Coil 36 56 - -
Sebi131g00076 357 FunFam Myb family transcription factor 216 274 - -
Sebi131g00076 357 SUPERFAMILY Homeodomain-like 215 275 IPR009057 -
Sebi131g00076 357 MobiDBLite consensus disorder prediction 92 113 - -
Sebi131g00076 357 MobiDBLite consensus disorder prediction 175 194 - -
Sebi131g00076 357 Gene3D - 216 273 - -
Sebi131g00076 357 MobiDBLite consensus disorder prediction 289 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi131g00076 Sebi-Chr131 904743 906352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi131g00076 1 267 G2-like Transcription Factor Family AT4G37180 40.000 1.42e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi131g00076 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi131g00076 - - pvu:PHAVU_002G021400g 474.937