Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi131g00074 ATGATCGTCCGGGAATTCGGCGTCGCTAGGCTCATGAGGGACAAACACACCCAAGAGCTTGTTGCTGTCAAGTATATCGAACGTGGAGATAAGATTGATGAAAATGTGAAGAGAGAAATCATTATCACAGGTCTCTCAGACATCCTAACATTGTTAGGTTTAAGGAGGAGGGATATTTATATTTACGAAAAATGTTCTATGAAATTTCACTCAGGTCATTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAACTATTTGAGCGGATATCCAAAGCAGGGCGTTTAATGAGGATGAGGCCTCGGTATCTTCTTTCAACAACTCATATCTGGGGTCAACTATTGTCATGCAATGGAAGTATGTCACCGGGACCTGAAGTTGGAAAACACTTGTTGGATGGAAGCGCAGCACTTCAGTTGAAGATATGTGATTTTGGATACTCCAAGTCTTCAGTGTTTCATTCACAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGTATTGCTGAAGCAAGAGTATGATGGCAAGATTGCTGATGTCTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGAACGTATCCTTTTGAAGATCCTAATGATCCAAAGGATTTCCGGAAGACAATTCAGGGTCTCAGTGTCCAGTATTCCATTCCAGACTCTGTTCAAATATCTCCTGAATGTCGCCACCTTATCTCAAGGATCTTTGTTTTCGACCCTGCTGAGAGAATCACCATTCCTGAAATATTGAAAAATGAATGGTTTCTGAAGAATAATCCCGCTGACTTGATGGATGAAAAGATGTTGAGCAACCATTTTGAAGAGCCAGATCAGCCCATGCAGAGCATGGATACAATCATGCAGATAATTTCAGAAGCTACCATACCAGCAGCTGGGACCTATTCCTTAGACCAATTTATGGCTGATAACATTGATGTAGATGATGATATGGATGAATTAGACTCTGACTTTGAGCTTGATGTAGATAGCAGTGGGGAGATAGTGTATGCCATGTAA 1047 0.4155 MIVREFGVARLMRDKHTQELVAVKYIERGDKIDENVKREIIITGLSDILTLLGLRRRDIYIYEKCSMKFHSGHLTPTHLAIVMEYASGGELFERISKAGRLMRMRPRYLLSTTHIWGQLLSCNGSMSPGPEVGKHLLDGSAALQLKICDFGYSKSSVFHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGTYPFEDPNDPKDFRKTIQGLSVQYSIPDSVQISPECRHLISRIFVFDPAERITIPEILKNEWFLKNNPADLMDEKMLSNHFEEPDQPMQSMDTIMQIISEATIPAAGTYSLDQFMADNIDVDDDMDELDSDFELDVDSSGEIVYAM 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi131g00074 348 Gene3D Phosphorylase Kinase; domain 1 5 85 - -
Sebi131g00074 348 Pfam Protein kinase domain 143 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi131g00074 348 Gene3D Transferase(Phosphotransferase) domain 1 87 272 - -
Sebi131g00074 348 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi131g00074 348 PANTHER SERINE/THREONINE KINASE 5 285 - -
Sebi131g00074 348 SUPERFAMILY Protein kinase-like (PK-like) 6 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi131g00074 Sebi-Chr131 873012 878081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi131g00074 6 294 CBL-interacting serine-threonine protein kinases AT4G24400 31.126 7.26e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sebi131g00074 Pkinase 1.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi131g00074 K14498 - gmx:100783967 457.218