Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi131g00025 ATGGCACAGGAATGTCCACACGTCTTAGACAGAGGCAGTAAGCTCCTCTTCCATCTCTCACTCGCTAATGGGTCCTCATCAGAGGAACCCAGGCTAAGTGACACCGTTTTCGATGATGGTTTTGTCTTTGATATTGATCCTGCCTTGCTACTCGTCCCTCGTAAACTAATCATTGGTGATGTCATCGGAGAAGGCGCTTACTCCATTGTACACAGAGGATGGTATGAATGTCGTCCTGTTGCTATAAAGATTATACTCCCAGAAAGAACAGTGAATGCTACACCAGAATGCAAGGCAAAATTTCAGCGGGAGGTGAACTTGATATCTAAGATGCAACATGAAAATATTGTGAAGTTTATTGGCGCCTGTGTGGAACCATCGATGATGATAGTCACAGAACTTTTGGAAAGTGGCTCACTTCAGAAAAATTTAAAGAGCATCTATCCTTGGACTCTTGGTTTGGAACAATCTTTAAGCTTTGCTCTGGATATTTCTCAAGCTATGGAGTATTTGCATGCAAATGGCATTATTCACCGTGATTTGAAGCCTGGTAATTTACTGCTTACAAAGGACAAGATGCATGTTAAACTTGCTGATTTTGGTTTAGCTAGAGAAGATATATGTGATGAGATGACTTGTGAGGCTGGTAGTTACCGATATATGGCTCCTGAGTTATTCAACAAAGATCCACTTCCAAAAGGAACAAAGAAATTCTATGATCGCAAGGCGGATGTCTATAGCTTCGCAATGGTTCTGTGGTCAATAATCAAAAACCAAACTCCATTTAAAGAAAGGAAAGACTTGATGGCTGCATATGCTGCAGTAAACGTATACTTGAGGCCAAGTGTGGATGAGTTTCCAACACCTGTACTTCCCCTGCTGCAGTCCTGCTGGGCAGAGGACCCAAAACTCCGACCAGAATTTACAGAAATCACTGAAACTCTGGCAGGGCTTCTCCAGAAATTTTGGCCACCAAGGACTACACTCTCCAGCATAACTGAGATTGAAGAAATTGAAAGTAGTGATGATGAAGAAATTCCAAAGGCACAGGAACCAAGCCTAGACTCTGTGGAGGAGAACAATATTCCCAAACATCATGATGATGATGATAAAGGGACTATAAAAACCAATGGCGGAACAGAGAGTGAGTCTCATTCTCAGAGTAGAAGAGCACAGACCCCTTTCCCTGAGTCAACCGAAGGCAAGCCAAAAAAGAAAAGCAAGTTCAGGTTTTTATTGGCGTGTTTCCGCAGTTGCCATGCTTTTTGA 1269 0.4255 MAQECPHVLDRGSKLLFHLSLANGSSSEEPRLSDTVFDDGFVFDIDPALLLVPRKLIIGDVIGEGAYSIVHRGWYECRPVAIKIILPERTVNATPECKAKFQREVNLISKMQHENIVKFIGACVEPSMMIVTELLESGSLQKNLKSIYPWTLGLEQSLSFALDISQAMEYLHANGIIHRDLKPGNLLLTKDKMHVKLADFGLAREDICDEMTCEAGSYRYMAPELFNKDPLPKGTKKFYDRKADVYSFAMVLWSIIKNQTPFKERKDLMAAYAAVNVYLRPSVDEFPTPVLPLLQSCWAEDPKLRPEFTEITETLAGLLQKFWPPRTTLSSITEIEEIESSDDEEIPKAQEPSLDSVEENNIPKHHDDDDKGTIKTNGGTESESHSQSRRAQTPFPESTEGKPKKKSKFRFLLACFRSCHAF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi131g00025 422 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Sebi131g00025 422 MobiDBLite consensus disorder prediction 377 395 - -
Sebi131g00025 422 ProSiteProfiles Protein kinase domain profile. 56 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi131g00025 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Sebi131g00025 422 SMART serkin_6 56 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi131g00025 422 MobiDBLite consensus disorder prediction 345 376 - -
Sebi131g00025 422 Pfam Protein tyrosine and serine/threonine kinase 58 315 IPR001245 GO:0004672|GO:0006468
Sebi131g00025 422 MobiDBLite consensus disorder prediction 335 405 - -
Sebi131g00025 422 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 56 318 - -
Sebi131g00025 422 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Sebi131g00025 422 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672|GO:0006468
Sebi131g00025 422 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Sebi131g00025 422 PRINTS Tyrosine kinase catalytic domain signature 286 308 IPR001245 GO:0004672|GO:0006468
Sebi131g00025 422 SUPERFAMILY Protein kinase-like (PK-like) 50 333 IPR011009 -
Sebi131g00025 422 CDD STKc_MAP3K-like 62 315 - -
Sebi131g00025 422 Gene3D Phosphorylase Kinase; domain 1 49 136 - -
Sebi131g00025 422 Gene3D Transferase(Phosphotransferase) domain 1 137 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi131g00025 Sebi-Chr131 251370 256140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi131g00025 38 320 MAP Kinase Kinase Kinase AT5G66710 55.986 9.59e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sebi131g00025 PK_Tyr_Ser-Thr 1.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi131g00025 - K04427 gsj:114390113 419.468