Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi131g00024 ATGGGAACTGGAGAAGAAAGCACAACTAAACCTTCTAAACCATCTTCAACTTCTTCAGCTCAGATACCACTGGCACCTTCATATCCTGACTGGTCAAGCTCCATGCAGGCTTATTATGCTCCTGGAGTCACTCCGCCTCCTTTCTTTGCCTCTACTGTTGCTTCTCCAACTCCTCATCCCTATTTGTGGGGAAGCCAACATCCTCTCATTCCACCATATGGTACTCCTGTTCCATATCCAGCTATATATCCTCCCGGGAGTGTCTATGCTCATCCTAGCATGGCAACGACTCCAAGCACCACACAGCCTGGCACAGAATTTGTAGGCAAGGGTCCTGATGGAAAAGATCGGGTTTCTCCCAAAAATTCAAAGGGTGTATCTGCAAATACTGGTTCTAAAGCAGGAGACAATGGAAATGCAGGCTCGGGGTCAGGAAATGATGGCATCTCACAAAGCAGTGCTGAAAGTGGTTCAGAGGGATCATCAGATGATGTTAATGATGAAAATACTAACCAACAGGAATCAGCTACAAACAAGAAGGGTAGCTTTGACCAAATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTGTTGGTGGCATTTCTCAATCAACTGTACCTGGAAAGCCTGTTGGGTCAATATCTGCAACTAATCTTAATATTGGAATGGAATTGTGGAGTGCGTCTTCTGGTGGTGCTGAAGCTGCAAAAATGAGACACAATCCATCTGCTGCTTCAGGAGCTGTTACTCCTTCAACCATAATGGGACGTGAAGTCGCACTTGGTGAACAGTGGATACAAGACGAACGTGAGCTGAAAAGACAGAAGAGGAAACAATCTAATAGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCGTTGGGAAATGAGAATCAAACTTTAAGAGAAGAGCTGAGGAAAGTATCCGAAGAATGCGAGAAGCTTTCATCTGAAAATAATTCTATCAAGGAAGAGTTGAAACGGTTGTGTGGGCCAGAAGCAGTTGCTAACCTTGAATAA 1056 0.4498 MGTGEESTTKPSKPSSTSSAQIPLAPSYPDWSSSMQAYYAPGVTPPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYPAIYPPGSVYAHPSMATTPSTTQPGTEFVGKGPDGKDRVSPKNSKGVSANTGSKAGDNGNAGSGSGNDGISQSSAESGSEGSSDDVNDENTNQQESATNKKGSFDQMLVDGANAQNNSVGGISQSTVPGKPVGSISATNLNIGMELWSASSGGAEAAKMRHNPSAASGAVTPSTIMGREVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVESLGNENQTLREELRKVSEECEKLSSENNSIKEELKRLCGPEAVANLE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi131g00024 351 FunFam BZIP transcription factor 271 322 - -
Sebi131g00024 351 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 276 291 IPR004827 GO:0003700|GO:0006355
Sebi131g00024 351 Gene3D - 272 327 - -
Sebi131g00024 351 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 346 IPR044827 GO:0003700|GO:0006355|GO:0043565
Sebi131g00024 351 Pfam bZIP transcription factor 269 331 IPR004827 GO:0003700|GO:0006355
Sebi131g00024 351 SMART brlzneu 269 333 IPR004827 GO:0003700|GO:0006355
Sebi131g00024 351 MobiDBLite consensus disorder prediction 122 210 - -
Sebi131g00024 351 MobiDBLite consensus disorder prediction 1 26 - -
Sebi131g00024 351 SUPERFAMILY Leucine zipper domain 272 328 IPR046347 GO:0003700|GO:0006355
Sebi131g00024 351 MobiDBLite consensus disorder prediction 271 294 - -
Sebi131g00024 351 MobiDBLite consensus disorder prediction 86 210 - -
Sebi131g00024 351 Coils Coil 282 337 - -
Sebi131g00024 351 CDD bZIP_plant_GBF1 274 324 IPR045314 GO:0003700|GO:0006355
Sebi131g00024 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 271 334 IPR004827 GO:0003700|GO:0006355
Sebi131g00024 351 MobiDBLite consensus disorder prediction 92 106 - -
Sebi131g00024 351 Pfam G-box binding protein MFMR 1 94 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi131g00024 Sebi-Chr131 241183 243683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi131g00024 1 351 bZIP Transcription Factor Family AT4G36730 53.782 3.06e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi131g00024 MFMR 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi131g00024 K09060 - gmx:100808533 535.413