Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi131g00023 ATGAGAGTTCCCGTTTCACCATCCCCACAGGCCAACCCAAAATCCAGTAACGCAATCCGTACCATTTCCCTCCACAACAACACAGGCCCGTGTTACGAGCCCACTTCTGTCCTCGACCTCTGCCGGAGCCCGAGCCCCGGTACCGTCCCTGAAAAGCCCACTGATAACTCACTTGTCACCAACTCTCAAGACCAAGAACAAGAGTGTTTGGAGCTGGACGACCATGCGTTGCATAATTTAGATTGGGATTCCATTATGAAGGACTTGGGTTTGCACGACGAGTCTGGTGCTCCCGTTTTGAAGACCATTCTCCACCCCAACAATCCATGCGATATCCCTCTTCCTCCCCCTGAATTCACACCCTTCGATCAAGCCACCGCAGAATTCACCGACATGTACTCCAATATTCAAAACATTGGTTACAACTACAACTACACCACCATGGACCAGAACGGCTTCGATTTCATCGAAGAGCTTATCCGCGCCGCTGATTGCTTCGACAGCAACCAGCTACAACTGGCGCAGGTGATATTGGAGCGGCTCAATCAACGGCTACGATCTCCCGTGGGAAAACCCCTTCAGCGAGCGGCGTTTTACTTCAAAGAAGCTCTCCAGTCCCTTCTCTCCGGTTCGAACCGGACGCCACGGCTTTCTTCCTTGGTGGAAATCGTGCATAGTATCAGAACCTTCAAGGCCTTCTCCGGAATCTCTCCCATTCCAATGTTCTCCATCTTCACCACCAACCAAGCACTCCTCGAAGCGCTTCAGGTTCACGCCTCTTCATTCCTCCACGTCATCGACTTCGATATTGGCCTTGGGATTCAATACGCTTCTCTCATGAAGGAGATTGCGGAGAAGGTAGAGTCCTGCAAAATCGCCTCACCTCTCCTCCGCATCACCGCCGTTGTTCCTGAAGAGTACGCCGTCGAGAGCACGCTCATCCGCGAGAATCTCACTCAGTTCGCTCAGGAACTCAGGATCCGAGTCCAGGTTGAGTTCGTGCTGCTCCGAACCTTTGAGACGCTGTCCTTTAAGGCAATCAAGTTCGTCGACGGAGAGAAGACCGCCGTTCTCTTGTCTCCGGCGATCTTCCGCCGCCTCGTCTCAGCCGCGGCGTTTCTGGCGGACGTGCGGAGTGTCTCTCCATGCGTGGTGGTTTTCGTGGACGGCGAAGGATGGGCGGAGGCAGCGGCGGCGTCGACGTTCAGGCGCGGCGTGGTGAGCAGCTTGGAGTTCTACTCGATGATGCTGGAGTCGCTGGATGCCTCGATCGTGGGAGGAGGAGGTGAATGGGTGAGGAGGATTGAGATGCTGCATCTACGCCCCAAGATAATGGAGGTGGTGGAAGGGACTGGACGGCGAATGCCGCCGTGGAGGGAGGCGTTTTACGGTGCGGGCATGAGGCCGGTACAGTTAAGCCAGTTCGCGGATTTTCAAGCAGAGTGTTTGTTGGCCAAGTCACATATCAGGGGCTTCCACGTGGCCAAGCGTCAGGCTGAGCTGGTGCTCTTCTGGCATGAGCGGGCCATAGTTACCACGTCAGCTTGGCGCGGTTAG 1557 0.5517 MRVPVSPSPQANPKSSNAIRTISLHNNTGPCYEPTSVLDLCRSPSPGTVPEKPTDNSLVTNSQDQEQECLELDDHALHNLDWDSIMKDLGLHDESGAPVLKTILHPNNPCDIPLPPPEFTPFDQATAEFTDMYSNIQNIGYNYNYTTMDQNGFDFIEELIRAADCFDSNQLQLAQVILERLNQRLRSPVGKPLQRAAFYFKEALQSLLSGSNRTPRLSSLVEIVHSIRTFKAFSGISPIPMFSIFTTNQALLEALQVHASSFLHVIDFDIGLGIQYASLMKEIAEKVESCKIASPLLRITAVVPEEYAVESTLIRENLTQFAQELRIRVQVEFVLLRTFETLSFKAIKFVDGEKTAVLLSPAIFRRLVSAAAFLADVRSVSPCVVVFVDGEGWAEAAAASTFRRGVVSSLEFYSMMLESLDASIVGGGGEWVRRIEMLHLRPKIMEVVEGTGRRMPPWREAFYGAGMRPVQLSQFADFQAECLLAKSHIRGFHVAKRQAELVLFWHERAIVTTSAWRG 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi131g00023 518 Pfam GRAS domain family 156 517 IPR005202 -
Sebi131g00023 518 ProSiteProfiles GRAS family profile. 146 517 IPR005202 -
Sebi131g00023 518 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 154 511 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi131g00023 Sebi-Chr131 229824 231380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi131g00023 70 517 GRAS Transcription Factor Family AT4G36710 57.479 1.75e-172 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi131g00023 GRAS 2.5e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi131g00023 - - gmx:100807470 721.465