Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi130g00078 ATGGGTGGAGCTCTGCCTTACATGAAATCATCTCAGAAAGAGAGAACCAACAATTACAAAGCCCCTGAGGCTCGTGTCCCTGGCTGCAGACCCACCCAGAAATGGGACGTATATTCATTTGGAGTTGTATTGCTTGAATTGCTAACTGGGAAGTCACCAGAATCATCTCCCACTACATCAACTTCTATGGAAGTTCCTGACTTGGTAAGGTGGGTAAGAAATGGGTTCGATCAAGAAAGCCCATTATCTGAAATGGTTGATCCATCGCTGCTCCAAGAAGTGCGTGCTAAGAAAGAGGTACTGGCTGTGTTTCATGTAGCCCTTGGATGCACTGAAGGAGACCCTGAGGTCAGGCCTAGAATGAAAACTGTCTCTGAAAATCTTGAAAGGATTGGAACGTAA 402 0.4577 MGGALPYMKSSQKERTNNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPESSPTTSTSMEVPDLVRWVRNGFDQESPLSEMVDPSLLQEVRAKKEVLAVFHVALGCTEGDPEVRPRMKTVSENLERIGT 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi130g00078 133 SUPERFAMILY Protein kinase-like (PK-like) 14 130 IPR011009 -
Sebi130g00078 133 MobiDBLite consensus disorder prediction 1 26 - -
Sebi130g00078 133 ProSiteProfiles Protein kinase domain profile. 1 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi130g00078 133 Pfam Protein tyrosine and serine/threonine kinase 7 128 IPR001245 GO:0004672|GO:0006468
Sebi130g00078 133 Gene3D Transferase(Phosphotransferase) domain 1 5 131 - -
Sebi130g00078 133 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 131 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi130g00078 Sebi-Chr130 1117445 1117846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi130g00078 1 131 Receptor kinase-like Gene Family AT1G67510 70.588 2.46e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi130g00078 PK_Tyr_Ser-Thr 8.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi130g00078 - - var:108346287 246.899