Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi130g00072 ATGGGAAACAATAGTTGGCATGTCAAAGATTTCCACACAGACCCATTTCAAAAACTGTTCTCTTTTGCAAATGGTGATAGAAGGAAGAAATGGAGGATTCATGAGGGTGGTTTCATTAGCTTAGCCCTTTTCCTGTTTCTTCTGCAGGCTCTGGCTTCCAACATTCAACCTGTCTCAGGCCATTTGTGGGATGGAGTTGTTGTCACCCAAGCAGATTATCAAGCTCTGAGGGCTATTAAGCATGAGCTGATTGACTTCAAAGGGGTTCTGAGAAGCTGGAATGACAGTGGTTTAGGTGCTTGTTCAGGTGGGTGGGCAGGAATCAAATGTGTGAAAGGAGAGGTTATTGCAATTCAGCTTCCTTGGAGAGGTTTGGGTGGCCGTATCTCAGAGAAAATTGGGCAGCTTCAATCTCTTAGGAAGCTCAGTTTCCATGACAATGTTCTTGCTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGAGTTTATCTCTTCAATAACAGGCTTTCAGGTTCTATTCCTCCTTCTATTGGCAATTGTCCAATGCTTCAGTCTTTTGATGTTAGCAATAATGCCCTCACTGGTAAAATCCCTCCTAGTTTAGCAAACTCCAATAGGATATTCAGGATTAATTTGAGTTTCAACTCACTTTCTGGATCCATTCCTAGCAGTTTTACTCTGTCCCCTTCTCTAACTGTTCTTGCTCTCAACCACAACAATCTTTCTGGTCCTATCCCAGATTATTGGGGTGGAAAGGGAAAGAAAGCTTCCCAACTTCAGGCATTGACCCTTGATCACAATCTCTTTTCTGGAACCCTCCCAGTTTCTCTAAGCAAGCTGGCTTTGCTTGAAAATGTTTCTTTAAGTCATAACCAGATTGTAGGACCTATTCCAAGTGAACTAGGTGCACTTTCCAGGCTTAGAATTCTTGATCTATCAAACAATGCCATCAATGGCAGCATTCCTGCTAGCTTCTCTAACCTTTCCTCTCTTGTTTCATTGAATCTAGAGAGCAATCAACTTGAAAACCATATCCCAGATACCTTGGACAGGAAAAGAGCTGCTTCAAGCAGAAAGAGTGGCAAGACTGCTAAGGCCACAGCATCTGCCAGGAGTGTTGAAAAAGGTACTCCAGCTGGTGGTGAAGTTGAATCAGGAGGTGAAGCTGGTGGGAAACTAGTTCACTTTGATGGGCCATTTGTATTTACTGCTGATGATCTCTTGTGTGCCACTGCTGAGATAATGGGAAAAAGTGCATATGGAACAGCATACAAGGCAACACTGGAAGATGGGAACCAAGTTGCTGTGAAAAGGTTGAGGGAAAAACCTACTAAAGGGCAGAAGGAATTTGAAGCTGAGGTTGCTGCACTTGGAAAAATCAGACACCCAAATCTCTTAGCCCTTAGAGCCTACTATTTAGGACCCAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGACCAAAGGAAGCCTAGCATCATTCCTTCATGCTCGTGGGCCTGAAATTGTCATTGAATGGCCAACAAGGATGAAAATAGCAATTGGTGTCACACATGGTCTGTGCTACCTTCATAACCAAGAGAATATAGTACATGGGAATCTTACCTCTAGCAATATACTATTAGATGAACAGACAAATGCCCATATCACAGATTTTGGTCTTTCAAAGCTAATGACAGCATCTGCCAACACCAACATCATTGCTACAGCAGGAAGTCTTGGCTACAATGCACCAGAGCTTTCAAAGACAAAGAAGCCTAACACAAAAACTGATGTGTACAGTCTTGGTGTCATCATTTTGGAGCTCCTAACTGGTAAACCACCTGGGGAGCCAACCAATGGCATGGACTTGCCTCAATGGGTGGCATCCATAGTAAAAGAAGAGTGGACAAATGAAGTGTTTGATTTGGAACTCATGAGGGATGCACCAACTATAGGTGATGAGCTTCTTAATACATTGAAATTGGCTCTTCATTGTGTGGATCCATCTCCAGCTGCTAGGCCAGAAGTTAAGCAAGTTTTGCAGCAATTAGAGGAGATCAAACCAGACTTGGCTGCAGGGGATGAGGGAGATAAGGAGGTCCAAACAACAACTGAATAA 2112 0.4337 MGNNSWHVKDFHTDPFQKLFSFANGDRRKKWRIHEGGFISLALFLFLLQALASNIQPVSGHLWDGVVVTQADYQALRAIKHELIDFKGVLRSWNDSGLGACSGGWAGIKCVKGEVIAIQLPWRGLGGRISEKIGQLQSLRKLSFHDNVLAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSIGNCPMLQSFDVSNNALTGKIPPSLANSNRIFRINLSFNSLSGSIPSSFTLSPSLTVLALNHNNLSGPIPDYWGGKGKKASQLQALTLDHNLFSGTLPVSLSKLALLENVSLSHNQIVGPIPSELGALSRLRILDLSNNAINGSIPASFSNLSSLVSLNLESNQLENHIPDTLDRKRAASSRKSGKTAKATASARSVEKGTPAGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKPTKGQKEFEAEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIEWPTRMKIAIGVTHGLCYLHNQENIVHGNLTSSNILLDEQTNAHITDFGLSKLMTASANTNIIATAGSLGYNAPELSKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVKQVLQQLEEIKPDLAAGDEGDKEVQTTTE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi130g00072 703 FunFam Leucine-rich repeat receptor-like protein kinase 398 489 - -
Sebi130g00072 703 SUPERFAMILY L domain-like 71 350 - -
Sebi130g00072 703 Gene3D Ribonuclease Inhibitor 69 374 IPR032675 -
Sebi130g00072 703 Gene3D Transferase(Phosphotransferase) domain 1 491 700 - -
Sebi130g00072 703 FunFam Nuclear pore complex protein NUP107 69 227 - -
Sebi130g00072 703 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 355 684 - -
Sebi130g00072 703 MobiDBLite consensus disorder prediction 349 390 - -
Sebi130g00072 703 Pfam Leucine rich repeat 307 345 IPR001611 GO:0005515
Sebi130g00072 703 CDD STKc_IRAK 419 684 - -
Sebi130g00072 703 Pfam Leucine rich repeat N-terminal domain 71 110 IPR013210 -
Sebi130g00072 703 SMART LRR_typ_2 332 356 IPR003591 -
Sebi130g00072 703 SMART LRR_typ_2 308 331 IPR003591 -
Sebi130g00072 703 SMART LRR_typ_2 160 184 IPR003591 -
Sebi130g00072 703 FunFam Piriformospora indica-insensitive protein 2 255 351 - -
Sebi130g00072 703 FunFam Pollen receptor-like kinase 1 490 695 - -
Sebi130g00072 703 Gene3D Phosphorylase Kinase; domain 1 419 490 - -
Sebi130g00072 703 SUPERFAMILY Protein kinase-like (PK-like) 417 686 IPR011009 -
Sebi130g00072 703 ProSiteProfiles Protein kinase domain profile. 413 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi130g00072 703 Pfam Protein tyrosine and serine/threonine kinase 417 681 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi130g00072 Sebi-Chr130 1041988 1044659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi130g00072 139 703 Receptor kinase-like Gene Family AT3G51740 54.860 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi130g00072 PK_Tyr_Ser-Thr 7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi130g00072 - - rvl:131321698 793.497