Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi130g00060 ATGGGAGCGTGTTGCAGCTGCCAAGTTTCATTTGTAGGAAAGGTGCATGATGCACAATATGAATCAAACCATAACAATGATACTGCACATGAACATGGTGGGGCCCGGGTCTTGTTGAGAGGAGCCTCTAACTTTGTATCAATGTACAGCCAAAGGGGTACCAAAGGAGTTAATCAAGATGCATTGACAGTTTGGGAGGACTTCACTGGAGAAAAAGACATGATCTTTTGTGGTGTGTTTGATGGTCATGGTCCTCTAGGACACAAGTTTTCACACTGTATACGTGAAAATCTACCCTCCAAACTCTCTTCAGCAATCAAACTCACACAAGAAAGGGTTTGCAAACACTATGATGCTAATGTTGCAAACACAGACAGTAATGATGATGTCTATGATGATGAGGATAACCAACAATTGTCCTTTGCTTCATGGGAGGGATACTTCCTGAGGTCCTTCAAAGAAATGGACCAATACCTTGCTAGGAACATTGACACTGATGGTTATTGTGGTGGTAGCACTGCTGTAACTGTAATCAAACAGGGTGATCAGCTGATAGTTGGTAATTTGGGGGATTCACGTGCAGTTCTTTGCACAAGAGCAGATGACAACCAGCTTATTCCTGTTCCACTTACTGTTGATTTGAACCCAGATATTCCAACTGAAGCTTCAAGGATCATCAATCGTGGAGGTAGAGTTTTTGCTGCAGAAGAAGATCCAGGTGTAAACAGAATGTGGATGCCTGAAGGTGACTGCCCTGGATTAGCTATGTCAAGAGCCTTTGGAGATTTTTGCCTAAAAGACTATGGCCTCTCCTCAGTTCCTGATGTATCTTATAGAACACTTACCAAAAGGGATGAATTTGTGGTTTTGGCTAGTGATGGGGTATGGGATGTGCTAACAAACAATGAAGTGATAAACATAGTTGCTTCAGCACCAAAGAGGTCCATGGCAGCCAAATTGTTAGTAAAGCGTGCTATTCAGGCTTGGAAATGCAAGAATCCTTGTTTCCATGTTGATGATTGTACAGCCATATGCTTGTTTCTCAATGATGAGCCTGTTTTAACCCATTCCCAGTCCAATGTGAGAGGAAATAATAGACATCACAGGAAGCACCTGCATTGCTCTTGA 1128 0.4255 MGACCSCQVSFVGKVHDAQYESNHNNDTAHEHGGARVLLRGASNFVSMYSQRGTKGVNQDALTVWEDFTGEKDMIFCGVFDGHGPLGHKFSHCIRENLPSKLSSAIKLTQERVCKHYDANVANTDSNDDVYDDEDNQQLSFASWEGYFLRSFKEMDQYLARNIDTDGYCGGSTAVTVIKQGDQLIVGNLGDSRAVLCTRADDNQLIPVPLTVDLNPDIPTEASRIINRGGRVFAAEEDPGVNRMWMPEGDCPGLAMSRAFGDFCLKDYGLSSVPDVSYRTLTKRDEFVVLASDGVWDVLTNNEVINIVASAPKRSMAAKLLVKRAIQAWKCKNPCFHVDDCTAICLFLNDEPVLTHSQSNVRGNNRHHRKHLHCS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi130g00060 375 Pfam Protein phosphatase 2C 109 327 IPR001932 -
Sebi130g00060 375 PANTHER PROTEIN PHOSPHATASE 43 346 IPR015655 GO:0004722|GO:0006470
Sebi130g00060 375 CDD PP2Cc 44 348 IPR001932 -
Sebi130g00060 375 ProSiteProfiles PPM-type phosphatase domain profile. 45 348 IPR001932 -
Sebi130g00060 375 Gene3D - 41 350 IPR036457 -
Sebi130g00060 375 SMART PP2C_4 36 346 IPR001932 -
Sebi130g00060 375 SUPERFAMILY PP2C-like 43 350 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi130g00060 Sebi-Chr130 918564 920531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi130g00060 1 352 PP2C-type Phosphatase Gene Family AT5G01700 48.333 3.94e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi130g00060 - - cam:101501265 523.857