Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi130g00056 ATGGATGATAAACGTGGAACTTCTCATCTCAAAACTACTCATGATCATTTTCGAATTGAAGTTGATAACTTTACACCTCCTTCAATGCCCTTTTCTCCTTCATCAATTTTTGCCCCTTACTCTGATTTTCCACCTGGTTTCAGCCCAACAGCGTTGTTTAATTCACCTCTGTTTCTCTCTTCTCCTAATATGCCTGCACCTTATACAACTGCTGAGCCTTCTTCTGGTCAGAATCAGAGCTTCAACCAGAGAAACAGTTCAACTGAACAACATAACAACAAGGAAGAAGAGAGAAAGTACTCTGACATCTCTTTCCAAACCCAAACAAAGCAGCAAGTGCCTCTCTTTCAATCTTCCTCAAGCATGTTTCAAGCAGAGCCAATAAAGAAACAGGACAAGTTGATGTTCAATGAAACTACAAAGCAAACTGATTTTTCATTTCAGAGGACAGCAACAAAATCTGAGAATCCATCCACTCAAGGCTTCTCAGAAATGGCCACAATCAAACCTGAAATACAAAGCAATTCTGCTTCTGGGTCTTGTTATTTAAACTACACCAATGCTTCTATGTCTATTAGAGAACAAAGGAAATCAGAAGATGGGTACAAGTGGAGGAAATATGGAGAGAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTACAAGTGCACACATTCAAGTTGTCCAATGAAGAAGAAAGTTGAAAGGTCTTTGGATGGACATATTACTGAAATAGTATACAAAGGAAGTCATAACCATCCCAAGCCACAGTCTACCAAAAGAACAAGTTCTCACTCAATTCATCAACCTTCTTCATCATGTACTACCTCAGGGATTTCTGATCATTCTATGGGAGAGGAAGACTTTGAGCAAACATCACATACTAGTTATTCTGGAGGGGATGATGATGACCTTGGACCAGATGCCAAAAGATGGAAGGGAGAGAATGAAAATGATGGCTATTCCTATTCAACTGCAGGGAGTAGAACTGTTAAAGAGCCTAGAGTTGTGGTTCAAACCACAAGTGAAATTGATATACTTGATGATGGCTACAGGTGGAGGAAATATGGACAGAAAGTGGTCAAAGGAAACCCAAATCCAAGAAGCTACTATAAATGTGTAACCCCTGGTTGTCCAGTGAGAAAACATGTTGAGCGAGCTGCACATGATATGAAAGCTGTGATCACAACTTATGAAGGGAAACACAACCATGATGTGCCTGTAGGACGAGGAAGTGCAAGCTATGGCATGAACAGGAACAACAACACCAACAATGTTACTGCCCCTGCCCCTATAAGGCCCTCAGTGGTCACTAATTATTCTAGCTCAGCAAGTTTGACAAATTCACTTCATGATACAAAGTTACCAACTTCTGGAAATCAAGAACCTTTTCAGCTAGACATGCTTCTGAGCCCTGGAAGCTTTGGATTTGCGGCTCTGGACAGATCAATGGGTTCATATGCCAATCCTGAACAATACTCAGATGCTACATTCTCTAAGGATGACTCATTCCTTCAATCTTTTCTCTCAAAGAACTTCTAA 1545 0.4032 MDDKRGTSHLKTTHDHFRIEVDNFTPPSMPFSPSSIFAPYSDFPPGFSPTALFNSPLFLSSPNMPAPYTTAEPSSGQNQSFNQRNSSTEQHNNKEEERKYSDISFQTQTKQQVPLFQSSSSMFQAEPIKKQDKLMFNETTKQTDFSFQRTATKSENPSTQGFSEMATIKPEIQSNSASGSCYLNYTNASMSIREQRKSEDGYKWRKYGEKQVKGSENPRSYYKCTHSSCPMKKKVERSLDGHITEIVYKGSHNHPKPQSTKRTSSHSIHQPSSSCTTSGISDHSMGEEDFEQTSHTSYSGGDDDDLGPDAKRWKGENENDGYSYSTAGSRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVTPGCPVRKHVERAAHDMKAVITTYEGKHNHDVPVGRGSASYGMNRNNNTNNVTAPAPIRPSVVTNYSSSASLTNSLHDTKLPTSGNQEPFQLDMLLSPGSFGFAALDRSMGSYANPEQYSDATFSKDDSFLQSFLSKNF 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi130g00056 514 Gene3D WRKY domain 335 401 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 MobiDBLite consensus disorder prediction 54 88 - -
Sebi130g00056 514 Gene3D WRKY domain 185 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 SUPERFAMILY WRKY DNA-binding domain 340 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 MobiDBLite consensus disorder prediction 247 328 - -
Sebi130g00056 514 ProSiteProfiles WRKY domain profile. 343 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 Pfam WRKY DNA -binding domain 349 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 Pfam WRKY DNA -binding domain 199 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 ProSiteProfiles WRKY domain profile. 199 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 64 428 IPR044810 GO:0003700
Sebi130g00056 514 SMART WRKY_cls 198 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 SMART WRKY_cls 348 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 FunFam WRKY transcription factor 186 258 - -
Sebi130g00056 514 MobiDBLite consensus disorder prediction 54 101 - -
Sebi130g00056 514 FunFam WRKY transcription factor 33 335 401 - -
Sebi130g00056 514 SUPERFAMILY WRKY DNA-binding domain 194 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi130g00056 514 MobiDBLite consensus disorder prediction 253 283 - -
Sebi130g00056 514 MobiDBLite consensus disorder prediction 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi130g00056 Sebi-Chr130 866508 869792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi130g00056 193 479 WRKY Transcription Factor Family AT2G38470 54.489 6.55e-105 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi130g00056 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi130g00056 K13424 - gmx:100127367 690.263