Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi130g00035 ATGGCTTCTGGGCAGCGTAAAAAAGCAGCTATGCAGCGCAAGTTGCAACAACTTCGATCCGTCACAAATTCCAGTGCTGTGAACAAAGCCTCAATCATTGTGGATGCCACCAGATACATAGAGGAGTTGAAGCAAAAAGTGGAGGGATTGAACTCTGAGCTTGGAACCGCTGAATCCTCATCAACCTCCCAAGATAAACTACCTATGGTCACCGTAGAAACCCTAGAAAAGGGTTTCCTTATTAATGTGTTTTCAGAAAGGAATTGCCCTGGTATGCTTGTGGCAATACTTGACGCCTTTGAAGAACTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTAGAAGCTGTGGGAGGAGAAAGTCAAGAGAATGAGAGCATCGACGCGCAAGTGGTGAAGCAAGCAGTGCTACAAGCAATCAACAACATGGATTAA 453 0.4547 MASGQRKKAAMQRKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVEGLNSELGTAESSSTSQDKLPMVTVETLEKGFLINVFSERNCPGMLVAILDAFEELGLDVLDARVSCEDTFQLEAVGGESQENESIDAQVVKQAVLQAINNMD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi130g00035 150 CDD ACT_UUR-ACR-like 90 146 - -
Sebi130g00035 150 ProSiteProfiles ACT domain profile. 81 150 IPR002912 -
Sebi130g00035 150 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 146 - -
Sebi130g00035 150 Coils Coil 33 60 - -
Sebi130g00035 150 Gene3D - 1 68 IPR036638 GO:0046983
Sebi130g00035 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 57 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi130g00035 Sebi-Chr130 496176 497583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi130g00035 11 144 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 26.667 2.66e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi130g00035 - - ccaj:109816195 265.003