Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi130g00027 ATGCAGGTCCTAATTTTCAGTCAGCTAGAGGATTTGAAAGTGGTGGATGAGATCAAGAAGGCTGTGGACGAAGCATGTGGAAGACCAATTTTAGGAGGCCCCACATGGGAAGTGCAACTAGGGAGAAGAGATTCCACAACAGCAGCCGTGATGCTGCAAATAAAGACATTCCACAACCCATTTTTCAGCCTTTCTCAACTTATCGACATCTTCAAGAGCCATGGTCTAGATGAGAAGGATCTGGTGGTTCTCTCTCTGGAGCCCACAGTATTGGATTTTCACGTTGTGTTACGGTTAGGGACCGTATCTACAATGACACTGACATCAATCCCTACTTTGCACGATCGCTTAGATACTTATGTCCAAGAATTGGAATGGACTCTAACCTGCTCCTTTGGACCCAACAGCTGCCAAGTTTGA 420 0.4571 MQVLIFSQLEDLKVVDEIKKAVDEACGRPILGGPTWEVQLGRRDSTTAAVMLQIKTFHNPFFSLSQLIDIFKSHGLDEKDLVVLSLEPTVLDFHVVLRLGTVSTMTLTSIPTLHDRLDTYVQELEWTLTCSFGPNSCQV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi130g00027 139 Gene3D - 30 57 - -
Sebi130g00027 139 Gene3D Peroxidase, domain 2 58 95 - -
Sebi130g00027 139 ProSiteProfiles Plant heme peroxidase family profile. 16 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi130g00027 139 Pfam Peroxidase 25 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi130g00027 139 PANTHER PEROXIDASE 72-RELATED 12 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi130g00027 139 SUPERFAMILY Heme-dependent peroxidases 11 94 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi130g00027 Sebi-Chr130 376391 377116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi130g00027 12 90 Peroxidase AT5G05340 36.842 4.50e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi130g00027 K00430 - gmx:100802035 100.138