Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi130g00014 ATGGGTGCACAAAACGGCATCGTCGAAGACACAACAGGGATAGAGAAAGAGCAAGAGCAAGAACCATGGACGACAACAGAGGAGGAACCAACAGGTGTCGTTTTGTTCGGGAAATACGAGCTGATAAAGCTTCTTGGTGTTGGCGCGTTCGCGAAGGTGTACCACGCGCGTGACGTGAACACGGGGCAGAGCGTGGCGGTGAAGGCCGTGAGCAAACGCAAAGTCCAGAGAAACGGTTACGCGGCACACGTTATGCGCGAAGTCTCTATCATGCGCCGGCTGCGCCACCCACACACGGTGAAACTCTTCGAGGTGTTGGCCACGAAGACCAAAATCTACTTCATCATGGAGTTCGCGGCCGGCGGCGAGCTCTTCGGCGTGGTCGCCGCCGAGGGACGGTTGACGGAGGATCTTTCCCGGCGATACTTCCGTCAACTAATCTCCGCCGTCAAGTACTGCCACTCCCGCGGCGTCTTCCACCGTGACCTCAAGCTCGACAACCTCCTCGTCGACGATAACATGGACCTCAAAGTCACTGATTTCGGGTTGGGCGCGATTCAGGAACAGATCCGATCCGACGGGATGCTCCACACCGTTTGTGGAACTCCTGCTTACGTGGCACCGGAGATTCTCGCGAAAAAGGGCTACGACGGTGCCACGGTGGATGTATGGTCATGCGGCGTCGTTTTGTTTGTGCTCACTGCTGGGTATTTACCCTTCAATGATTACAATATTACGGTTTTGTACCGGAAGATATACAGGGGACAGTTTCGGTTCCCGAAATGGATGTCACATGATCTTAAGAATCTCTTATCAAGGCTGTTGGACACTAATCCCGAGACGAGAATCACTTTAGATGAAGTCATGGAGGACCCATGGTTTAGTCGGGGTGGGTATGCGGATCTTTGGACCCGACCCATTGAACCTGAATGGGAGGAGAACCGGGTCGCGACAAAGAGTTTGAACGCGTTTGATTTGATATCTTTTTCATCCGGGTTTGACATGTCGGGTTTGTTTACCGATCCGGAATATTCTGAATGCGTGGAACGGTTCATTACGGGGGAGAAAACGGAGAGGGTAGCGAAAAACGTGGAAGAGGTGGCGGAGAAAGAGAGAGTGACGGCGAGGAAAGAGAAGGACGGTTGCGGAGGATTGAAGCTAGAAGGGTTGGATGGTACTTTTGTGATTTTGGTTGGGTTTTACCGGTTAACGGATGAATTGGTTGTGGTTGAGGTGAAGAGGAGAGAGAGAAGAGTGGGAGGCAGTGCACTTTTTGGAGAGATGCATTAA 1290 0.524 MGAQNGIVEDTTGIEKEQEQEPWTTTEEEPTGVVLFGKYELIKLLGVGAFAKVYHARDVNTGQSVAVKAVSKRKVQRNGYAAHVMREVSIMRRLRHPHTVKLFEVLATKTKIYFIMEFAAGGELFGVVAAEGRLTEDLSRRYFRQLISAVKYCHSRGVFHRDLKLDNLLVDDNMDLKVTDFGLGAIQEQIRSDGMLHTVCGTPAYVAPEILAKKGYDGATVDVWSCGVVLFVLTAGYLPFNDYNITVLYRKIYRGQFRFPKWMSHDLKNLLSRLLDTNPETRITLDEVMEDPWFSRGGYADLWTRPIEPEWEENRVATKSLNAFDLISFSSGFDMSGLFTDPEYSECVERFITGEKTERVAKNVEEVAEKERVTARKEKDGCGGLKLEGLDGTFVILVGFYRLTDELVVVEVKRRERRVGGSALFGEMH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi130g00014 429 Pfam NAF domain 319 377 IPR004041 GO:0007165
Sebi130g00014 429 SMART serkin_6 39 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi130g00014 429 Gene3D Kinase associated domain 1, KA1 316 427 - -
Sebi130g00014 429 Pfam Protein kinase domain 39 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi130g00014 429 Gene3D Phosphorylase Kinase; domain 1 9 120 - -
Sebi130g00014 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Sebi130g00014 429 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Sebi130g00014 429 ProSiteProfiles Protein kinase domain profile. 39 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi130g00014 429 FunFam Non-specific serine/threonine protein kinase 119 301 - -
Sebi130g00014 429 SUPERFAMILY Protein kinase-like (PK-like) 35 331 IPR011009 -
Sebi130g00014 429 Gene3D Transferase(Phosphotransferase) domain 1 121 298 - -
Sebi130g00014 429 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 32 414 - -
Sebi130g00014 429 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Sebi130g00014 429 FunFam Non-specific serine/threonine protein kinase 20 120 - -
Sebi130g00014 429 MobiDBLite consensus disorder prediction 1 27 - -
Sebi130g00014 429 CDD CIPK_C 322 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi130g00014 Sebi-Chr130 261197 262486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi130g00014 34 415 CBL-interacting serine-threonine protein kinases AT2G30360 60.411 8.32e-168 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi130g00014 Pkinase 3.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi130g00014 - K12761 qsa:O6P43_034460 498.434