Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi130g00009 ATGTACAAGGGAAGATTAGGAGACAAAGCTCAGTTTGGATATGTTGAAACTGACCCATCTGGGCGATATGGACGTTTCAGGGATATTCTAGGCAAAGGAGCCGTGAAGGTAGTGTATAGAGCATTTGATGAGGTCCTAGGAATAGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCATTCACCAGACCAACTTCAGCGCCTATATTCAGAGGTTCATCTCCTCAAGAACTTGGACCATGACTCTATCATCACCTTCCATGATTCTTGGATCGATGCCAGTTGTAGAACCTTCAACTTCATCACTGAATTATTCACCTCTGGCACCTTAAGAGAGTATAGAAAAATGTACCCTCGAGTAGATATCAGAGCAGTGAAGAACTGGGCTCGCCAGATACTAAATGGTTTGGAGTATTTGCACAGTCATGATCCTCCTGTGATACATAGAGACCTCAAGTGTGATAATATATTTGTTAATGGCCATCTGGGGCAGGTCAAGATTGGTGACTTAGGCCTTGCAGCCATTCTTCGTGGCTCCCAACATGCCCACAGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATACAATGAACTAGTAGACATATACTCCTTTGGGATGTGTATGATAGAGCTGTTTACTTCAGAGTTCCCATACAGCGAGTGCTCCAACCCTGCTCAAATATACAAGAAAGTTACTTCTGGGAAGCTGCCAGAAGCATTTTATAGAATCCATGATTTGGAAGCCCAAGGTTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGTTGAGAAAGAGAAAACTTCAATAAGTGACCAAACAAAGAGCACATACATGACAATCACTGGATCAATAAATAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAGATTTCTAACAAAACTGGGCTCACAAGAAATATATACTTCCCATTCAACACAATAAATGACACTGCTATTGAGGTGGCAATGGAGATGGTTAAAGAACTTGAAATCAGTGACTTGGAACCATTGGAGATTGCTGAAATGATAGAGGAGGAGATATCAGCTTTAGTTCCAACATGGAAGGATTGGGGCAATTCAAAGTATCAAAGACAACATAGTTTTAACTATGAAGAAGAGGATGATATCAGTAACCACCATCCTTTCTTCTCATCCTCTTCTCGTTCTTCCTCTCATGGTTCTCTCCCAATGTTTGGTTCTTCCTACAAGAACAACATCCATCTTTGTGGGAACCATTACCCTTTTTCTCAAGATTGGTCTCAAGATGATCTATTTATGAATGATGATGAAAGCTCTCAAAGCTCAATGAACTCCTTGAAGTGTTTCAATTTCCATTGCTGCGACTCAAGCAATGAAGATGAGCATCATCCAACACTAGTAGTAGGAGCAGAACCACTTAGCTTCACACCAAAGGCCAGCAAAATGAGCACAAGATTCTGTCCTCGAGAAGAGGCTGATTTCATCAAACAGTTTTACAACATGAGATTGAGAATGGATTCTCACTCTCACATGTGTCATGGATCAGGGCATGGATATAAGAGGTTGACAAGGATTCGTTCCTATGTTGATGTGAGGAGACAGCAACTGCAAAGGTCACTGATGGAGGAGATGCACAAGAAAAGGATGTTCAAGACGGTTGGTACCATTCAGAACATTGGGTTTCAGAATCCAGAAGGAGATTGA 1701 0.4139 MYKGRLGDKAQFGYVETDPSGRYGRFRDILGKGAVKVVYRAFDEVLGIEVAWNQVKLGDVFHSPDQLQRLYSEVHLLKNLDHDSIITFHDSWIDASCRTFNFITELFTSGTLREYRKMYPRVDIRAVKNWARQILNGLEYLHSHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQHAHSTPEFMAPELYEEEYNELVDIYSFGMCMIELFTSEFPYSECSNPAQIYKKVTSGKLPEAFYRIHDLEAQGLWENVWQMSQRVEKEKTSISDQTKSTYMTITGSINNEEDDTVFLKVQISNKTGLTRNIYFPFNTINDTAIEVAMEMVKELEISDLEPLEIAEMIEEEISALVPTWKDWGNSKYQRQHSFNYEEEDDISNHHPFFSSSSRSSSHGSLPMFGSSYKNNIHLCGNHYPFSQDWSQDDLFMNDDESSQSSMNSLKCFNFHCCDSSNEDEHHPTLVVGAEPLSFTPKASKMSTRFCPREEADFIKQFYNMRLRMDSHSHMCHGSGHGYKRLTRIRSYVDVRRQQLQRSLMEEMHKKRMFKTVGTIQNIGFQNPEGD 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi130g00009 566 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Sebi130g00009 566 Gene3D Transferase(Phosphotransferase) domain 1 107 285 - -
Sebi130g00009 566 SMART serkin_6 24 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi130g00009 566 ProSiteProfiles Protein kinase domain profile. 24 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi130g00009 566 Pfam Protein kinase domain 28 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi130g00009 566 SUPERFAMILY Protein kinase-like (PK-like) 19 264 IPR011009 -
Sebi130g00009 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Sebi130g00009 566 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 442 - -
Sebi130g00009 566 FunFam Probable serine/threonine-protein kinase WNK1 8 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi130g00009 Sebi-Chr130 150907 154015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi130g00009 12 381 MAP Kinase Kinase Kinase AT3G51630 62.319 2.78e-179 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi130g00009 Pkinase 3.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi130g00009 K08867 - gmx:100816187 894.419