Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00165 ATGGATAGTACTACTACTACTCCACACATGCTTCAAATGATTTCTAGCTTGGTCATGATTCTATCTATAATTTCTTCATTAACCTCTTCAGCAAGATCCCTGCAAGTGGGATTTTATAGCTCAACATGTCCATCTGCTGAGTCAATAGTGAGAAGCACAGTAAACAAAGCGGTTTCTGTCAATCCTGGCATAGCTGCTGGTTTGATTAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGTGATGGTTCTGTATTACTTGCATCTACACCTGGTAACCCAATTGCTGAGAGAGACAACATTATCAACAACCCAAGCTTACGTGGCTTTGAGGTCATTGAAGAGGCCAAGACTCAATTAGAGGCTGCATGTCCTCAAACTGTGTCATGTGCTGACATTCTAGCCTTTGCAGCTAGAGACAGTGCCCTTAAAGTTGGTGGCATAAACTATGATGTACCCTCAGGACGCAGAGATGGTCGTGTCTCAATTGGTGATGAAGTGCCACAAAATCTACCTGGACCAGACTTGAAAGCTGATGAACTTATTAACAAATTTGCAAGAAAAGGGTTATCAGCAGATGAAATGGTGACACTTTCAGGAGCACATTCAATAGGAGTATCACATTGTTCTTCCTTCTCTAAACGCCTATACACTTTCAATGACACAGCTACACAAGATCCATCCATGGACTCTTCATTTGCTGCATCATTGAAAACCAAGTGTCCTCCACCACCAAGCAACACAGACCCAACAGTGGATCTTGAAGCTGCCACTCCTATTCGTTTGGACAACAAGTACTATGATGGACTCATCAACCATCGTGGCTTGTTGACATCAGATCAAACGTTGTTAAGTAGCCAATCAACACAACAAATGGTGCTAAGTAATGCTAATTATGGTGCAAATTGGGCTACCAAGTTTGCGGAAGCAATGGTTCACATGGGTTCCATAGAGGTGGTCACTGGCTATGATGGCGAGATTAGGAAGCATTGCAGCTTTGTTAATTAA 1008 0.4246 MDSTTTTPHMLQMISSLVMILSIISSLTSSARSLQVGFYSSTCPSAESIVRSTVNKAVSVNPGIAAGLIRMHFHDCFVRGCDGSVLLASTPGNPIAERDNIINNPSLRGFEVIEEAKTQLEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGRVSIGDEVPQNLPGPDLKADELINKFARKGLSADEMVTLSGAHSIGVSHCSSFSKRLYTFNDTATQDPSMDSSFAASLKTKCPPPPSNTDPTVDLEAATPIRLDNKYYDGLINHRGLLTSDQTLLSSQSTQQMVLSNANYGANWATKFAEAMVHMGSIEVVTGYDGEIRKHCSFVN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00165 335 Gene3D - 37 335 - -
Sebi12g00165 335 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 FunFam Peroxidase 37 181 - -
Sebi12g00165 335 CDD secretory_peroxidase 34 334 IPR033905 GO:0004601|GO:0042744
Sebi12g00165 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Sebi12g00165 335 PANTHER PEROXIDASE 25-RELATED 21 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 ProSiteProfiles Plant heme peroxidase family profile. 33 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 Pfam Peroxidase 50 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Sebi12g00165 335 Gene3D Peroxidase, domain 2 172 314 - -
Sebi12g00165 335 FunFam Peroxidase 172 314 - -
Sebi12g00165 335 SUPERFAMILY Heme-dependent peroxidases 34 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00165 335 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00165 Sebi-Chr12 3349064 3350383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00165 16 335 Peroxidase AT4G11290 44.753 9.22e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi12g00165 K00430 - gmx:100786791 499.975