Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00164 ATGGATAGTACTTCTCCACACATGCTTCAAATGATTTCTACCTTGGTCATGATTCTATCTATATCTTCATTAGCATACACAACATCTCTGAAAGTTGGTTTTTATAGCTCAACATGTCCATCTGCTGAGGCAATAGTGAGAATCACAGTAAACAAAGCGGTTGCTCTCAATCCTGGCATAGCTGCTGGTTTGATTAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGTGATGGTTCTGTATTACTTGCATCCACACCTGATAACCCAATTGCTGAGAGAGACAACTTTATCAACAATCCAAGCTTGCGTGGCTTTGAGGTCATTGAAGAGGCCAAGGCTCAATTAGAGGCTGCTTGTCCTCAAACTGTGTCATGTGCTGACATTCTAGCCTTTGCAGCTAGAGACAGTGCCCTCAAAGTTGGTGGCATAAACTATGATGTACCCTCAGGACGTAGAGATGGTCGTGTCTCAATTGGTGATGAAGTGCCACAAAATCTACCTGGACCAGACTTCAATGCTGATGATCTTATTAGCAAATTTGCAACAAAAGGGTTATCAGCAGATGAAATGGTGACACTTTCAGGAGCACATTCAATAGGAGTATCACATTGTTCCTCCTTCTCTAAGCGCCTGATTACACAAGATCCATCCATGGACCCTTCATTTGCTGCATCATTGAAAACCAAGTGTCCACCACCACCAAGCAACACAGACCCAATAGTGGTTCTTGATACTATTACCCCTAATCGTTTGGACAACAAGTACTATGAGGGATTGGTCAACCATCGTGGCTTGTTGATCTCAGATCAAACATTATTAAGTAGCCAATCAACACAACAAATGGTGTTAAGCAATGCTAATTATGGTTCAAATTGGGCAACCAAGTTTGCAGAAGCAATGGTTCATATGGGTTCTATAGATGTGCTAACTGGCTATGATGGTGAGATCAGGAAGCATTGCAGCTTTGTTAATTAA 978 0.4182 MDSTSPHMLQMISTLVMILSISSLAYTTSLKVGFYSSTCPSAEAIVRITVNKAVALNPGIAAGLIRMHFHDCFVRGCDGSVLLASTPDNPIAERDNFINNPSLRGFEVIEEAKAQLEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGRVSIGDEVPQNLPGPDFNADDLISKFATKGLSADEMVTLSGAHSIGVSHCSSFSKRLITQDPSMDPSFAASLKTKCPPPPSNTDPIVVLDTITPNRLDNKYYEGLVNHRGLLISDQTLLSSQSTQQMVLSNANYGSNWATKFAEAMVHMGSIDVLTGYDGEIRKHCSFVN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00164 325 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Sebi12g00164 325 FunFam Peroxidase 168 304 - -
Sebi12g00164 325 Gene3D - 33 325 - -
Sebi12g00164 325 ProSiteProfiles Plant heme peroxidase family profile. 29 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 SUPERFAMILY Heme-dependent peroxidases 30 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 Gene3D Peroxidase, domain 2 168 304 - -
Sebi12g00164 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Sebi12g00164 325 PANTHER PEROXIDASE 25-RELATED 19 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 CDD secretory_peroxidase 30 324 IPR033905 GO:0004601|GO:0042744
Sebi12g00164 325 Pfam Peroxidase 48 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi12g00164 325 FunFam Peroxidase 33 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00164 Sebi-Chr12 3334906 3336566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00164 15 325 Peroxidase AT4G11290 45.201 8.89e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi12g00164 K00430 - gmx:100786791 492.656