Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00148 ATGGCAATGCTGAGGCAGGAAACGCTTCGACTTGAATTGGGGATTCAACGGTATCTTGGAGAGGACATGAGCTGTTTACAGTATGAGGATTTGACTAAGCTTGAACAAGAATTGGAGAACTCTGTTGCAAAAGTTCGAAACCGTCAGAATGAGCTCTTGCAACAGCAAATGGAGAATCTGCGAAGGAAGGAAAGAATCTTGGAAGATGAAAACAGCAATTTGTCCAATTGGGAGCAGCGGGCAGTGTTGGAGTTTCAGAAGGCAGCAGTGGAAGCAAATAACAAAGCAATGGATCATCACTTTCCATTCTTTGAAGAGCAACCTATCCTTCAACTTGCAGCCCCTGTTCTTCCTCAACTTCACCCTTATCTTCAGCTGGCTCAGCCCAATATCCATCATGACCCTACTCTCACCCCTGACCCTTGA 426 0.4554 MAMLRQETLRLELGIQRYLGEDMSCLQYEDLTKLEQELENSVAKVRNRQNELLQQQMENLRRKERILEDENSNLSNWEQRAVLEFQKAAVEANNKAMDHHFPFFEEQPILQLAAPVLPQLHPYLQLAQPNIHHDPTLTPDP 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00148 141 ProSiteProfiles K-box domain profile. 1 88 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi12g00148 141 Coils Coil 28 80 - -
Sebi12g00148 141 Pfam K-box region 2 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00148 Sebi-Chr12 3142401 3143217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00148 1 140 MADS-box Gene Family AT5G23260 39.394 1.16e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi12g00148 - - gmx:100783876 182.185