Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00143 ATGGCAAAAAGTCGGTTGAATACTTTAACTGAGTTAAGACGTGTTAGAGTGGTTGCTCAGATCCTAATGGTACATCGCTGTGGCAAATGGGTAAAAGTCTCTAGTACAGAACTTTTGCCTGGGGATGTTGTCTCTATAGGTCGTGGAGAGAAGTCTGTACCTGCAGATATGCTTATATTGGCTGGGAGTGCCATTGTGAATGAAGCTATTCTCACAGGAGAGTCTACTCCTCAATGGAAGGTTGGTATTCCTTTCCTTTTCTTCTAA 267 0.427 MAKSRLNTLTELRRVRVVAQILMVHRCGKWVKVSSTELLPGDVVSIGRGEKSVPADMLILAGSAIVNEAILTGESTPQWKVGIPFLFF 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00143 88 Pfam E1-E2 ATPase 22 80 - -
Sebi12g00143 88 PANTHER CATION-TRANSPORTING ATPASE-RELATED 2 84 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Sebi12g00143 88 SUPERFAMILY Calcium ATPase, transduction domain A 21 82 IPR008250 -
Sebi12g00143 88 Gene3D - 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00143 Sebi-Chr12 3043062 3043443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00143 1 83 Primary Pumps ATPases AT5G23630 73.333 5.11e-35 123