Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00130 ATGGAGCAAGAAGAATATACAAAGGAAGAAATTGATTGGAGTTACATAGAGTTTGTTGATAATCAAGATGTTCTTGATCTTATAGAGAAGCTTGTTCATAACATCTATCAGAAACCTGGCGGTATTATTGCTCTTCTAGATGAGGCTTGTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTATATCAAACATTTAAAGACAATAAACGCTTCAACAAGCCAAAGTTGTCTCGTACGGACTTCATTGTCAACCACTATGCTGGTGATGTCACTTATCAAACTGAACTTTTCCTTGATAAAAACAAAGACTATGTTGTTCCAGAGCATGCTGCTCTACTCAGTGCTTCCAAGTGCTCCTTTGTTTCAGGGCTTTTCCCACCTTTACCTGAGGAAACTACCAAATCAACAAAGTTCTCTTCTGTAGCCACTCAGTTTAAGCAACAATTGCAATCTTTGCTTGAAACACTGAATGCTACTGAGCCACACTACATTCGTTGCGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTCGAGAACAATAATATATTGCAACAGCTTCGATGCGGGGGAGTAATGGAGGCAATTAGGATAAGTTGTGCTGGATATCCCACAAGAAAGAGTTTTGAGGAATTTGTTAAGCGGTTTGGTATCTTGGAACCTCAGGTTTTGAAAGCATGCCCTGATGAGATGACTGCTTGCAAGAGGCTTCTAGATAGAGCGAACCTTACAGATTATCAGATTGGAAAGACAAAAGTGTTTCTAAGAGCAGGTCAAATGGCAGAACTAGATGCGTGTCGTGCTGAGGTCTTAGGAAAATCTGCAAGCATTATTCAAAGAAAAGTTCGCACATTTTTTTGTCAGAAATACTACAATTCATTACGCTTTTCTGCCATAGAACTACAAAGGGTTGTTAAAGGACAACTTGCACGCCATCAGTATGAATGCATGAGAAGGGAAGCTGCTTCTTTGAAAATCCAGAAATACTTCCGCATGTATCTTTCCAAAAGTGCTTATAAAGATACTTATGTCGCAGCTATTTATATTCAAACTGGTATGCGAGGGATGGCTGCTAGAAATGACCTTAGGTTCAGGAGGCGAACACAAGCTGCAATTGCAATTCAGGGTCACTATCGAGGCTATTTAGCTCGTACTTATTTCCGACGGCTAAAGAAAGCAACAATAGCAGTACAGTGTTCCTGGAGGAGAACACGTGCACGTAGAGAGCTTCGAAAGCTTAAAATGGCTGCTAAAGAAGCCAAGGCTCTAGAAGCTGCCAAAATTAATCTAGAAAAGCAAGTTGAAGAACTAACTTTGTGTCTACAAACAGAGAAGGAAATGAGGGAAGCCAAGACACAGGAAAATGAAAAATTACAACATGCTTTACAAGAGATGGAGCTTCAATTCCAAGAAACTAAGACAATACTCATCCAAGAACGTGAGGATGCTAGAAAAGTAGTTGAGGAATGTGAGGCTGCTAAGAAAGTAGCTGAAGAATGTGAGGCTGCCAAGAAAGAAGCAGAAAAAACTCAGGAGACTGTTAATGTTGTTAACAATGAATTGATTAATAAGCTTACTGCAGAAAATGAAGAACTCAAGGAGTTGGTTAATTCATTGGAAAAGAAAACTACACAGGAGTTTCCAGTTAATGTCACTGACAATGAACAAATCAATAAAGTGAATACAGAAAATGAACACCTTAAGGATCTGGTTAATTCATTAGAAAAGAAAACTATGCAGGAGTTACCTGTTAATGTCAGTGACAATGAACAAATCAATAATCTTACTGCAGAAAATGAACACCTTAAGGATCTGGTTAATTCATTAGAGAAGAAAACTATGCAGGAGTTACCTGTTAATGTCAGTGATAATGAACAAATCAATAAGCTTACTGCAGAAAATGAACACCTTAAGGATCTGGTTAATTCATTAGAAAAGAAAACTATGCAGGAGTTACCTGTTAATGTCAGTGACAATGAACAAATCAATAAGCTTACTGCAGAAAATGAACACCTTAAGGATCTGATTAATTCATTAGAAAAGAAAACTATGCAGGAGTTACCTGTTAATGTCAGTGACAATGAACAAATCAATAAGCTTACTGCAGAAAATGAACACCTTAAGGATCTGGTTAATTCATTAGAAGAGAAAACTATGCAGGAGTTACCTGTTAATGTCAATGACAATGAACAAATTAATAAGCCTACTGCAGAAAATGAACAACTTAAGGAGTTACCTGTTAATGTCACTGACAATGAACAAATCAATAAGCTTACTGCAGAAAATGAACAACTTAAGGATCAAGTTAATTCATTGGAAAGGAAAATTGATGAAATGGAGAGGAAATACGAAGAAAGTAATAGGCTTAGTGATGAGCGCATGAATCAAATTATAGAGACAGAATCAAAGATAATTGATCTAAAGACAAACATGCAGAGACTTGAAGAAAAAGTCTCTGACATGGAAACTGAGAATCAAGTTTTACGGCAACAAGCCCTGTTGAGTTCATCATCTAAAAGAATGTCAGGGAAGTTTTCAGCTGCTGTAATTCCGCCTTCAGAAAATGGTCAACAGGCACCGGCTAGTTCTACACCAGCAAAAACATTTGGTTCAGAAACGTTAAGGAGATCACAAATGGAGAGGCATCAAGAGAGTGTAGATGCTCTTTTCAAATGTGTGACCAAAGATCTTGGGTTCTCTGAAGGAAAACCTATTGCGGCATTTACAATTTATAATTGTCTGTTACATTGGAAATCTTTTGAAGCAGAAAAGACAAGTATATTTGATCGTCTTATTCAGCTAATTGGCTCTGCAATAGAGGATCAAGAAAATAATGATTGTATGGCTTATTGGTTGTCCAATACATCTACTTTGTTTTTCCACCTTCAGCGATGTCTAAGAGTACCTACAGCACGAAAACCTCCCACTCCAACATCATTTTTTGGGAGGGTGGCCCAGAGTTTCCGCTCATCTTCCAATAGTCTTTCCGGTAATGCACTTGATGTAGTGCAACAGGTCGATGCCAAGTATCCAGCTCTGCTTTTCAAACAACAACTTGCAGCTTATGTAGAAAAGATATATGGAATCATTAGAGAAAATTTGAAGAAAGACTTGTCACCTTTGCTTTCTTCTTGCATTCAGGCACACAAAACATCAAATGACAGCAGCAAACAAAATGGTTCTTGGCTCAGCATTACCAAATGCCTTAATAGAATTCTCAATATTCTAAAAGAAAATTATGTGCCTCAAATTCTAGTTCAGAGGTTATTTAATCAGATTTTTCAATACATCGATGCAGAAATCTTTAATAGCCTTCTTTCAGATAAAGAATATTGCACATTCAACAATGGAGAATATGTAAAATCAGGATTGGCGGAATTAGAACTATGGTGTAATGAAGTAACAGAGGAGTACGCTGACTCATCTTTGGATGAACTCAAATATGTGACACAAGCAGTTAGATTCTTGGTTACACAACAAAAGGATGGACTATCGTATGATGATCTTACAAATGACCTTTGCCCGGCCTTGAGTTCTCATCAACTTTATAGAATATGTACACTTTATGAGGATGACAATGACAAGGACAATACGCAGAGTGTATCACCAGATGTCACTACTAGATTGAAGCTTCTAATGACGGATGGTGATGACAAATCCTTCTTGTTGGAAGACAATTCAAGTCTCCCTATTATCGTTGAAGAGATTTCTGGTTCCCATAAAGATAAAACCGTTCCAAAAATAAAACCTCCTGCAGAACTTCTTGAGAATGCATCCTTTCAATTTTTACATGATTATTATTAG 3813 0.3732 MEQEEYTKEEIDWSYIEFVDNQDVLDLIEKLVHNIYQKPGGIIALLDEACMFPRSTHETFAEKLYQTFKDNKRFNKPKLSRTDFIVNHYAGDVTYQTELFLDKNKDYVVPEHAALLSASKCSFVSGLFPPLPEETTKSTKFSSVATQFKQQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNNILQQLRCGGVMEAIRISCAGYPTRKSFEEFVKRFGILEPQVLKACPDEMTACKRLLDRANLTDYQIGKTKVFLRAGQMAELDACRAEVLGKSASIIQRKVRTFFCQKYYNSLRFSAIELQRVVKGQLARHQYECMRREAASLKIQKYFRMYLSKSAYKDTYVAAIYIQTGMRGMAARNDLRFRRRTQAAIAIQGHYRGYLARTYFRRLKKATIAVQCSWRRTRARRELRKLKMAAKEAKALEAAKINLEKQVEELTLCLQTEKEMREAKTQENEKLQHALQEMELQFQETKTILIQEREDARKVVEECEAAKKVAEECEAAKKEAEKTQETVNVVNNELINKLTAENEELKELVNSLEKKTTQEFPVNVTDNEQINKVNTENEHLKDLVNSLEKKTMQELPVNVSDNEQINNLTAENEHLKDLVNSLEKKTMQELPVNVSDNEQINKLTAENEHLKDLVNSLEKKTMQELPVNVSDNEQINKLTAENEHLKDLINSLEKKTMQELPVNVSDNEQINKLTAENEHLKDLVNSLEEKTMQELPVNVNDNEQINKPTAENEQLKELPVNVTDNEQINKLTAENEQLKDQVNSLERKIDEMERKYEESNRLSDERMNQIIETESKIIDLKTNMQRLEEKVSDMETENQVLRQQALLSSSSKRMSGKFSAAVIPPSENGQQAPASSTPAKTFGSETLRRSQMERHQESVDALFKCVTKDLGFSEGKPIAAFTIYNCLLHWKSFEAEKTSIFDRLIQLIGSAIEDQENNDCMAYWLSNTSTLFFHLQRCLRVPTARKPPTPTSFFGRVAQSFRSSSNSLSGNALDVVQQVDAKYPALLFKQQLAAYVEKIYGIIRENLKKDLSPLLSSCIQAHKTSNDSSKQNGSWLSITKCLNRILNILKENYVPQILVQRLFNQIFQYIDAEIFNSLLSDKEYCTFNNGEYVKSGLAELELWCNEVTEEYADSSLDELKYVTQAVRFLVTQQKDGLSYDDLTNDLCPALSSHQLYRICTLYEDDNDKDNTQSVSPDVTTRLKLLMTDGDDKSFLLEDNSSLPIIVEEISGSHKDKTVPKIKPPAELLENASFQFLHDYY 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00130 1270 Coils Coil 751 834 - -
Sebi12g00130 1270 Gene3D - 206 269 - -
Sebi12g00130 1270 Coils Coil 700 720 - -
Sebi12g00130 1270 ProSiteProfiles IQ motif profile. 393 422 IPR000048 GO:0005515
Sebi12g00130 1270 Gene3D - 1 162 - -
Sebi12g00130 1270 ProSiteProfiles IQ motif profile. 322 348 IPR000048 GO:0005515
Sebi12g00130 1270 Coils Coil 406 478 - -
Sebi12g00130 1270 Coils Coil 665 685 - -
Sebi12g00130 1270 ProSiteProfiles Myosin motor domain profile. 1 271 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi12g00130 1270 SMART MYSc_2a 1 272 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi12g00130 1270 FunFam unconventional myosin-Va 324 372 - -
Sebi12g00130 1270 Coils Coil 630 650 - -
Sebi12g00130 1270 CDD MyosinXI_CBD 883 1237 IPR037975 GO:0007015
Sebi12g00130 1270 Gene3D - 373 422 - -
Sebi12g00130 1270 Gene3D - 273 323 - -
Sebi12g00130 1270 Gene3D - 324 372 - -
Sebi12g00130 1270 SMART DIL_2 1091 1198 IPR002710 -
Sebi12g00130 1270 FunFam unconventional myosin-Va 373 420 - -
Sebi12g00130 1270 Pfam DIL domain 1092 1195 IPR002710 -
Sebi12g00130 1270 Pfam IQ calmodulin-binding motif 371 391 IPR000048 GO:0005515
Sebi12g00130 1270 Pfam IQ calmodulin-binding motif 324 343 IPR000048 GO:0005515
Sebi12g00130 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 324 IPR027417 -
Sebi12g00130 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 325 421 IPR027417 -
Sebi12g00130 1270 Coils Coil 493 548 - -
Sebi12g00130 1270 ProSiteProfiles Dilute domain profile. 932 1218 IPR002710 -
Sebi12g00130 1270 MobiDBLite consensus disorder prediction 854 873 - -
Sebi12g00130 1270 Coils Coil 560 580 - -
Sebi12g00130 1270 Coils Coil 588 615 - -
Sebi12g00130 1270 PANTHER MYOSIN 351 1200 - -
Sebi12g00130 1270 ProSiteProfiles IQ motif profile. 348 374 IPR000048 GO:0005515
Sebi12g00130 1270 SMART iq_5 392 414 IPR000048 GO:0005515
Sebi12g00130 1270 SMART iq_5 369 391 IPR000048 GO:0005515
Sebi12g00130 1270 SMART iq_5 273 295 IPR000048 GO:0005515
Sebi12g00130 1270 SMART iq_5 344 366 IPR000048 GO:0005515
Sebi12g00130 1270 SMART iq_5 296 318 IPR000048 GO:0005515
Sebi12g00130 1270 SMART iq_5 321 343 IPR000048 GO:0005515
Sebi12g00130 1270 Pfam Myosin head (motor domain) 2 259 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi12g00130 1270 MobiDBLite consensus disorder prediction 852 873 - -
Sebi12g00130 1270 ProSiteProfiles IQ motif profile. 297 326 IPR000048 GO:0005515
Sebi12g00130 1270 ProSiteProfiles IQ motif profile. 370 399 IPR000048 GO:0005515
Sebi12g00130 1270 Gene3D Kinesin motor domain 163 205 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00130 Sebi-Chr12 2705341 2717960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00130 1050 1268 Myosins gene family AT1G04600 50.679 7.22e-57 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi12g00130 K10357 - gmx:100791031 1670.98