Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00122 ATGGACACAGTATTCAGTTTCATACTCCTCTTTCTCTTCACTATCACCTACACCTTCCTCCGCTCCCTGCATTCAAATAGACACAAACTCCCACCCGGACCACGTGGACTTCCCATAGTTGGAAACCTCCCCCAATTGGGCCAAAAGCCCCACCAAACCATGGCCAATCTCGCCAAGATCCACGGCCCAATCATGACCCTCAAGCTCGGCCAAGTAACCACCATAGTCATGTCTTCTTCCGAGACAGCCAAACAAGTGCTCCAAATCCACGACCAGTTCTTACCCAACAGAAAGATCCCTGACGCACTGAGAGCTGCCAACCATGACCAATACTGCTTGCCCTTCCTCCCAATCTCACATCGCTGGCGTGACCTTAGAAAAATCTGCAACAACCTTCTATTCTCCAACAAGACCCTTGACGCCAGTGGAGAACTCAGGCGCAAGAAGGTTCTAGAACTTTTCAACGACATCCATGAGAGCATGTTGAAGGGTGAAGTCGTTGATATAGGGAGGCTGGTTTTTAAGACAACGATAAACTTGTTGTCTAACACTATTTACTCAGAGGATTTGATTCACTCTGCGGACAAAGCAGGGGAGTTCAAGGAGGTGGTTGCGAATATCATGAAAGAGGTTGGGACACCGAATTTGGCAGATTTTTTTCCTGTGTTGAAGGTGATTGATCCACATGGGATCAGAGGGCGTACAGGTAGTCACTTTAGGAAGCTGTTGACCATCTTCAAAGGGTTGGTTGACCAAAGGGTGAAGCTGAGGAAACAGAGTGGTTACTGTTCCAAAAATGACATGTTGGATGCTATGCTTGACAACGCTGATGCAGAGGAAATGTACAAAGATAAGATTGAGCGTTTGTCATTGGACTTGTTTGTGGCAGGTAATGACACAGTTACAACTATGGTAGAATGGACAATGGCTGAGTTACTTCGTAACCCGGATGTCATGTCTAGAGCAAAAGCAGAGTTAGAACAAATTGTTGGTAAATGCAACATGGTTGAAGAGTCGGACATTGGGAGACTTCCTTACTTAAATGCAATAGTGAAAGAGACTTTCCGATTACACCCAGCAGGACCACTTTTGCTCCCTCGTAAAGGCGAAGTGGATCTGGAGATAAATGGCTATATAGTCCCAAAGGGTGCAGAAGTGTTGGTTAATGTATGGGCTATAGGGAGAGACCCCAATTTTTGGGACAATCCGAATGTGTTTTCACCTGAGAGATTCTTGGGTTCAGAAATCGACTTTAAAGGTCGAAGTTTTGAGCTGATACCATTTGGTGCCGGGAGGAGAATATGTCCTGGCATGCCATTAGCAATAAGGTTGTTGTTCTTGATGTTGGGTTTGCTTATCAATTGCTTTGATTGGGAGCTTGAAGGTGGAATCAAACCAAAGGATATGAATATGGAAGAAAAGTTTGGCCTTACCTTACAGAAGGCTCAACCTGTTCGAGTTGTTCCAATCAAAGTAAAAAATTAA 1485 0.4498 MDTVFSFILLFLFTITYTFLRSLHSNRHKLPPGPRGLPIVGNLPQLGQKPHQTMANLAKIHGPIMTLKLGQVTTIVMSSSETAKQVLQIHDQFLPNRKIPDALRAANHDQYCLPFLPISHRWRDLRKICNNLLFSNKTLDASGELRRKKVLELFNDIHESMLKGEVVDIGRLVFKTTINLLSNTIYSEDLIHSADKAGEFKEVVANIMKEVGTPNLADFFPVLKVIDPHGIRGRTGSHFRKLLTIFKGLVDQRVKLRKQSGYCSKNDMLDAMLDNADAEEMYKDKIERLSLDLFVAGNDTVTTMVEWTMAELLRNPDVMSRAKAELEQIVGKCNMVEESDIGRLPYLNAIVKETFRLHPAGPLLLPRKGEVDLEINGYIVPKGAEVLVNVWAIGRDPNFWDNPNVFSPERFLGSEIDFKGRSFELIPFGAGRRICPGMPLAIRLLFLMLGLLINCFDWELEGGIKPKDMNMEEKFGLTLQKAQPVRVVPIKVKN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00122 494 CDD CYP76-like 58 489 - -
Sebi12g00122 494 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 491 - -
Sebi12g00122 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Sebi12g00122 494 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 Gene3D Cytochrome P450 17 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 FunFam Cytochrome P450 76C4 22 488 - -
Sebi12g00122 494 Pfam Cytochrome P450 31 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi12g00122 494 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00122 Sebi-Chr12 2506321 2508169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00122 6 491 Cytochrome P450 AT2G45550 45.000 4.30e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi12g00122 - - lja:Lj2g3v0039250.1 661.759