Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00093 ATGAGTTCCAATAATTCTAAACAAAATGAGGTTGCAAAGGTTGATGATGCTTACCTCTCTGCTTTGTTGCTATCTTTTAGCCGTGTCTTTCCTGCAATCCTAAATGCTGCTATTGAACTCAATATTTTTGATATCATAGCTAAGTCATGTGATGAATATTCAACCTTATCTGCCTCTGAGATAGCTTCCCAACTTCCAAATCAACACCCAGAATTGGCCACTAGGCTTGAGCGCATATTGACTGTGCTAGCCAGTTATTCTCTTCTAACTTGCTCCATTCGGACCAATGAAGATGGTGAGAGAGAAAGAGTTTATGCACTCTCACCCATTGGTCAATACTTTGCATGTGATAAAGATGGAGGCTCTTTGGCTCCACTCTCAACTTTAGTGCATCGAGGATATCATAACATTTGGGATGATGTAAAAGATGCAATTTTGGACCTTAATAATAATAACCATTTCCAAAAGGTCTATGGACTGCCGGCTTATCAATATATGGAGAAAGATAAAGAGCTAAATAACATTTTTAATGAAGCAATGGCTCAATCCGGTCCATTAGAGATGAAAAGGATCCTTGAATTATATAAAGGATTTGAGGGAGTCTCAACATTGGTTGATGTAGGAGGTGGAGTAGGGCAGGCCTTAAAATTGATTCTTTCTGAATATCCTTCAATAAAAGGAATTAATTTTGATTTGCCTCAAGTGATTCAACATGCACCTCCTCATCCAGGGATAGAGCATGTAGGAGGAGACATGTTTGAAAGCGTTCCAAAGGGTGATGCCATTTTACTTAAGCTTGTATGTCATAATTGGTCAGATGAAGAATGTGTGAAGTTTTTAAAAAATTGCCACAAGGCTTTGCCACAAGATGGGAAGCTAATGGAAAGGAGAGAACTGAGAAAGAATTTGAGAGCTTATGCAAGAGCTCTGGATTTTCCAGATTTCATATTGCATGTAGTGATTTCTCAGTTATGTCTGGAGTAA 984 0.3841 MSSNNSKQNEVAKVDDAYLSALLLSFSRVFPAILNAAIELNIFDIIAKSCDEYSTLSASEIASQLPNQHPELATRLERILTVLASYSLLTCSIRTNEDGERERVYALSPIGQYFACDKDGGSLAPLSTLVHRGYHNIWDDVKDAILDLNNNNHFQKVYGLPAYQYMEKDKELNNIFNEAMAQSGPLEMKRILELYKGFEGVSTLVDVGGGVGQALKLILSEYPSIKGINFDLPQVIQHAPPHPGIEHVGGDMFESVPKGDAILLKLVCHNWSDEECVKFLKNCHKALPQDGKLMERRELRKNLRAYARALDFPDFILHVVISQLCLE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00093 327 PANTHER O-METHYLTRANSFERASE 24 293 IPR016461 GO:0008168
Sebi12g00093 327 PIRSF O-mtase 1 294 IPR016461 GO:0008168
Sebi12g00093 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 295 IPR029063 -
Sebi12g00093 327 FunFam Caffeic acid 3-O-methyltransferase 1 114 - -
Sebi12g00093 327 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 327 IPR016461 GO:0008168
Sebi12g00093 327 Pfam O-methyltransferase domain 138 294 IPR001077 GO:0008171
Sebi12g00093 327 Gene3D - 1 114 IPR036388 -
Sebi12g00093 327 SUPERFAMILY "Winged helix" DNA-binding domain 15 118 IPR036390 -
Sebi12g00093 327 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Sebi12g00093 327 Gene3D Vaccinia Virus protein VP39 116 304 IPR029063 -
Sebi12g00093 327 CDD AdoMet_MTases 203 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00093 Sebi-Chr12 2104976 2106759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00093 15 294 Monolignol Biosynthesis Gene Families AT5G54160 50.890 2.06e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi12g00093 - - gmx:100793053 446.432