Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00092 ATGAGTTCCAATTCTAAACAAATTGAGCTTCCCACAGAGGTAGCAAAGGTGGACGATGCTTACCTCTCTGCTTTGTTGCTATGTTTTAGCCGCATCTTCCCTGCAATCTTAAACACTGCTATTGATCTCAATTTGTTTGAGATCATAGCAAAGGCAAAAAGTGGTTCAAGCTTGTCTGCCTCTGAGATTGCTTCTCAACTTCCAAACCAACACCCAGAATTGGCTAATAGGCTTGAACGCATATTGCCTATACTAGCCAGTTATTGTCTTCTAGATTGTTCCATTCGCATCAATGAAGATGGTAACAGAGAAAGAGTCTATGCTCTCACACCCATTGGTCAATACTTTGCTTGTGATGCCAATGGAGGTTCTTTGGGTCCACTCTCACGTTTAATGCATCGAGGATATTCTGACGTTTGGAACGACGTAAAGGATGCAATTATGGACCCTAATAATAAAAACCATTTCACAAATATATATGGAATGGCTCTTTATCAATATACAGAGGAAGATAAAGAAATGAATCACATGGTCAACAAAGCAATGGCCCATGCTGGCCCATTAGAAATGAAAAGAATCCTTGAACTGTATAAAGGATTTGAGGGAGTGACAACACTGGTTGATGTTGGAGGTGGAGAAGGGAGAGCATTACAACAGATTATATCTAAGTATCCTTCAATTAAAGGAATTAATTTTGATTTGCCTCAAGTGATTCATATGCATCACCTCTTCCAGCTTGTATGTCACAATTGGTCAGATGAAGACTGTGTGAAGTTCTTAAGAAATTGTTACAAATCTTTGCCAAAACATGGAAAGGTTATTGTTCTGGACTACATAATGCCGGAAATTCCAAACCCGAGCAATATCTCTAAGCATACCTGCGTTATTGACACTCTAATGTTCCTAGTAAATGAGGGAAAGGAAAGATCTGAGAAAGAGTTTCAGAACTTGTGCATGAGCTCTGGATTTTCCAAATTTCATGTTGCTTGCAGTGATTTCTCAGCCATGTCAGGTGTGATGGAATTTTATAAATAA 1035 0.3894 MSSNSKQIELPTEVAKVDDAYLSALLLCFSRIFPAILNTAIDLNLFEIIAKAKSGSSLSASEIASQLPNQHPELANRLERILPILASYCLLDCSIRINEDGNRERVYALTPIGQYFACDANGGSLGPLSRLMHRGYSDVWNDVKDAIMDPNNKNHFTNIYGMALYQYTEEDKEMNHMVNKAMAHAGPLEMKRILELYKGFEGVTTLVDVGGGEGRALQQIISKYPSIKGINFDLPQVIHMHHLFQLVCHNWSDEDCVKFLRNCYKSLPKHGKVIVLDYIMPEIPNPSNISKHTCVIDTLMFLVNEGKERSEKEFQNLCMSSGFSKFHVACSDFSAMSGVMEFYK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00092 344 PANTHER O-METHYLTRANSFERASE 30 333 IPR016461 GO:0008168
Sebi12g00092 344 Gene3D Vaccinia Virus protein VP39 119 242 IPR029063 -
Sebi12g00092 344 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 334 IPR029063 -
Sebi12g00092 344 Gene3D Vaccinia Virus protein VP39 244 331 IPR029063 -
Sebi12g00092 344 SUPERFAMILY "Winged helix" DNA-binding domain 18 119 IPR036390 -
Sebi12g00092 344 Pfam Dimerisation domain 36 86 IPR012967 GO:0046983
Sebi12g00092 344 PIRSF O-mtase 1 243 IPR016461 GO:0008168
Sebi12g00092 344 PIRSF O-mtase 241 344 IPR016461 GO:0008168
Sebi12g00092 344 Pfam O-methyltransferase domain 140 239 IPR001077 GO:0008171
Sebi12g00092 344 Pfam O-methyltransferase domain 244 324 IPR001077 GO:0008171
Sebi12g00092 344 FunFam Caffeic acid 3-O-methyltransferase 2 116 - -
Sebi12g00092 344 Gene3D - 2 116 IPR036388 -
Sebi12g00092 344 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 344 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00092 Sebi-Chr12 2028995 2031407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00092 1 333 Monolignol Biosynthesis Gene Families AT5G54160 40.896 5.91e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi12g00092 - - aprc:113869089 486.493