Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00066 ATGTCAACTCAAGTTATAAAGCCATCTTTTACAACCCCTCATCATCTCAAGTACTTCAAACTCTCATTTCTTGAACAAATTTCACCATATCAATACGTTTCAGTTCTCTTCTTTTACTCTGCATCTGATGTCAGTGGTTACGAAACCGGCTCTACATCCCTGTGTGATAATTTGAAGGCTTCTTTATCAAATGTGTTAAACCTTTACTACCCACTTTGTGGAAGAATCAAAGGAAATGCCTACATTGACTGTAATGATGCAGGTGTGCCTTTCATGGAGGCTAAAGTTTCCTCCCATCTCTCTTCCATCTTAGAATACCCACAGGTCAATGTCTTGAAACAATTACTTCCACTTGATCCATACGAACCAGTATTTGCAAATGTTAACTATGAGGAACTAGTCACATTGGCAGTTAAAGTTAGCAAACTAAGTTGTGGTGGTGTAGTACTTGGTGTTTGCATGTCACACAAGATTGTTGATGGTATAGGGATGACTTCTTTCCTCAATGCTTGGGTTGAAACAATGAAGGTAAGTGGCAACCCAAAAAAACCTTACATGGAAGCAAGTTTATTATTTCCTACAAAAGACATGCATTTTATTACTCTACCATCCGGCATGGTTGAAAACAAAGAACTTGTAACTGCAAGATTAGTGTTTGATGGGAAAAGCTTGTCTAGGCTAAGAGACGAAAATAATGGCTATAGTCCCACCAGGGTTGAAGTTGTGACGGCTCTTATATGGAAATCAATGATGGAGGCAACGATAGGGTGTTCGAGGGGGGAAAAACTTGTCAGGTCTTTTGCATCACATGTTGTGAATATTCGTAGTCGCATGGTGCCACCATTGCCAGAGAACAGCATAGGAAATGTTGTTCATTTTGTTGTGACACCATTAGTTGAATTCGAAGTGGACAAAAGTGTTGGGTTGCAAGATTTGGCAATAATGGTTAAGAAAGCGATAACGAGACTTGATGCAGATTATGTGAGTAAACTTGGAGATGATGGCGGGTTTGATTGGATTATGGAGTCTAGAGAGAAATTGAAGCTTATGATCTCTAAGGAGATTCAATGGTCTAAGTTTTCCAGTTGGACAAGATTTCCTTTATATGAAATTGATTTTGGATGGGGAAAGCCAACTTGGGTGAGTAGTCTTTGTTTTCCTTCAAGAGATAATGTCAAATTGTTGCCCACAAGATGTGGGAAAGGGATAGAGGCATGGGTTATCTTGGATAAAGAGGTTATGGTTCAATTTGAGCGTAACGAAAAGCTTCTACAATATGCATCGATCTTACGTGCCTCTTGA 1302 0.3932 MSTQVIKPSFTTPHHLKYFKLSFLEQISPYQYVSVLFFYSASDVSGYETGSTSLCDNLKASLSNVLNLYYPLCGRIKGNAYIDCNDAGVPFMEAKVSSHLSSILEYPQVNVLKQLLPLDPYEPVFANVNYEELVTLAVKVSKLSCGGVVLGVCMSHKIVDGIGMTSFLNAWVETMKVSGNPKKPYMEASLLFPTKDMHFITLPSGMVENKELVTARLVFDGKSLSRLRDENNGYSPTRVEVVTALIWKSMMEATIGCSRGEKLVRSFASHVVNIRSRMVPPLPENSIGNVVHFVVTPLVEFEVDKSVGLQDLAIMVKKAITRLDADYVSKLGDDGGFDWIMESREKLKLMISKEIQWSKFSSWTRFPLYEIDFGWGKPTWVSSLCFPSRDNVKLLPTRCGKGIEAWVILDKEVMVQFERNEKLLQYASILRAS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00066 433 PANTHER F21J9.9 1 428 - -
Sebi12g00066 433 Gene3D - 1 200 IPR023213 -
Sebi12g00066 433 Pfam Transferase family 1 422 - -
Sebi12g00066 433 Gene3D - 209 427 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00066 Sebi-Chr12 1536119 1537420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00066 3 419 Monolignol Biosynthesis Gene Families AT5G48930 24.609 3.14e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi12g00066 - K13065 egr:104439652 349.747