Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi12g00022 ATGGATCCAAGAGAAAGAATATCACTCCCATTCCCAGAAGATGGTGGTGATGCTCCTGTACCAGCACCAGAATCCGAAGTTGAGCCAAGAGAAGGCATGACATATGAAATTGGTGGTGATGCTCCTGCACCAGCACCAGAAACAGAAATTGAAGGTGAAAATAATGATAAAAATAAAAAAAATAACAAAAATTGCACAAGTTTTGCCAATGAAAGGCTAAAAAACGCCCATGTTGCTCTCCAAGCATTGAAAGAGGCTATTTACTCTGACCCTTTCAATGTAACTGGTAATTGGGTTGGTAATGATGTTTGCTCCTACAATGGTGTGTTTTGTGCCCCTGCACTTGATGATTCCTCATTGGATGTGGTTGCTGGTGTTGATCTTAACCAAGCAGACATTGCTGGCCACCTCCCTGAAGAATTGGGTCTCTTGAAAGATGTTGCACTTTTCCACATTAACTCCAATAGATTTTGTGGAATTGTCCCACAGAGCTTAGAGAATCTCACTCTTATCCATGAGTTTGATATCAGCAACAACCGTTTTGTTGGTGGTTTCCCTTCTGTGGTCCTCAATTGGCCAAACTTGAAGTACTTGGATATCAGATTCAATGACTTTGAAGGAGCTTTACCTCCTGAGCTATTTCAGAAAGAACTTGATGCAATATTTTTGAACAACAACCGTTTCACATCTCTTATCCCAGAAACTCTAGGAAACTCCACAGCCTCAGTTGTGACCTTTGCTAACAATCATTTCTCAGGTTGCATTCCAAAATCAATAGGGAACATGGTGAACTTGAATGAGATTGTCTTCATAGGCAATGGCCTTGGTGGTTGCATCCCACAAGAGATTGGAATGATAAAGGATGTGACTGTTTTGGATGCTAGCAATAATGAGTTTGTAGGGACTCTTCCTAACTTGTCAGAATTGAAGAAAGTTGAGGTCATAGACATAGCACACAACAATCTTACTGGATATGTGTCTAACACTATATGCCAGTTACCTTCTTTGAAGAACTTCACATTCTCTGACAATTACTTCAATGGGGAAGCTCAAGCTTGTGTGCCTTCATCCAATTCAGGTGTTGCTTTTGATGACTCAAGCAATTGTTTGCCAGGGAAGAAGAATCAAAAGACATCCAAACAATGTTTTCCAGTGCTAACTCGCCATGTGGATTGTAGCAAGCAATGTGGTGGTGGAGGAAGTGGTAATGACAAAGGGAATAGCAATGTCCCATCAACACCAAAGCCAACTCCTTCACCTTCACCTGTAACAGAACCACCACAGACACCAAAGGCTGAGCCACCTCCAACACCAAAGGCAGAGCCGCCACCAACCCCAAAGGCAGAGTCACCACAAACCCCAAAGGCTGAGCCACCACCAACACCAAAGGCAGAACCACCACCAACACCAAAGGTTGAGCCACCAGCAACACCAAAGGCAGAACCACCACCAACACCAAAGGCAGAGCCACCATCAACACCAAAGGCTGAGCCACCTCAAACACCAAAGGTTGAACCACCTACAGTACACTCTCCTCCACCGCCTGTCCACTCACCTCCACCACCTGTTCACTCTCCTCCACCACCAGTCCACTCACCACCACCACCAGTTCACTCTCCTCCACCCCCTGTGTCCTCACCACCTCCACCAGTTTACTCTCCCCCACCCCCTGTCCACTCACCACCACCACCACCACCAGTTCAATCTCCACCACCACCAGTCCATTCTCCACCTCCACCGGTTTACTCTCCACCACCACCAGCTCATTCTCCACCTCCACCAGTTTACTCTCCACCACCACCAGTCCATTCTCCACCTCCACCGGTTTACTCTCCACCACCACCTGTCTACTCTCCTCCTCCCCCACCACCAGTTTACTCACCACCACCACCAGTTCATTCTCCACCTCCACCAGTGTACTCTCCACCACCACCTCCACCACCTGTTCACTCACCTCCTCCCCCAGTCCACTCACCACCACCACCCATCCACTCCCCACCACCACCAGTTTACTCTCCTCCTCCACCAGTCCACTCACCACCACCACCAGTGCAGTCTCCGCCACCACCACCAACATGGGAAGATATCATCCTCCCACCAATCTTCGGATCTGAATACAGGTCACCTCCACCACCAACAATTGCTGGATACTAA 2154 0.4768 MDPRERISLPFPEDGGDAPVPAPESEVEPREGMTYEIGGDAPAPAPETEIEGENNDKNKKNNKNCTSFANERLKNAHVALQALKEAIYSDPFNVTGNWVGNDVCSYNGVFCAPALDDSSLDVVAGVDLNQADIAGHLPEELGLLKDVALFHINSNRFCGIVPQSLENLTLIHEFDISNNRFVGGFPSVVLNWPNLKYLDIRFNDFEGALPPELFQKELDAIFLNNNRFTSLIPETLGNSTASVVTFANNHFSGCIPKSIGNMVNLNEIVFIGNGLGGCIPQEIGMIKDVTVLDASNNEFVGTLPNLSELKKVEVIDIAHNNLTGYVSNTICQLPSLKNFTFSDNYFNGEAQACVPSSNSGVAFDDSSNCLPGKKNQKTSKQCFPVLTRHVDCSKQCGGGGSGNDKGNSNVPSTPKPTPSPSPVTEPPQTPKAEPPPTPKAEPPPTPKAESPQTPKAEPPPTPKAEPPPTPKVEPPATPKAEPPPTPKAEPPSTPKAEPPQTPKVEPPTVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVYSPPPPVHSPPPPPPVQSPPPPVHSPPPPVYSPPPPAHSPPPPVYSPPPPVHSPPPPVYSPPPPVYSPPPPPPVYSPPPPVHSPPPPVYSPPPPPPPVHSPPPPVHSPPPPIHSPPPPVYSPPPPVHSPPPPVQSPPPPPTWEDIILPPIFGSEYRSPPPPTIAGY 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi12g00022 717 MobiDBLite consensus disorder prediction 1 63 - -
Sebi12g00022 717 FunFam Leucine-rich repeat extensin-like protein 1 77 238 - -
Sebi12g00022 717 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 239 326 - -
Sebi12g00022 717 Pfam Leucine rich repeat N-terminal domain 79 111 IPR013210 -
Sebi12g00022 717 MobiDBLite consensus disorder prediction 399 717 - -
Sebi12g00022 717 Gene3D Ribonuclease Inhibitor 74 372 IPR032675 -
Sebi12g00022 717 PRINTS Proline rich extensin signature 410 422 - -
Sebi12g00022 717 PRINTS Proline rich extensin signature 427 443 - -
Sebi12g00022 717 PRINTS Proline rich extensin signature 463 484 - -
Sebi12g00022 717 PRINTS Proline rich extensin signature 451 463 - -
Sebi12g00022 717 SUPERFAMILY L domain-like 78 350 - -
Sebi12g00022 717 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 63 615 - -
Sebi12g00022 717 MobiDBLite consensus disorder prediction 413 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi12g00022 Sebi-Chr12 353051 355204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi12g00022 53 536 Trihelix Transcription Factor Family AT1G49490 56.213 2.03e-170 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi12g00022 - - vvo:131634815 565.844