Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi129g00043 ATGTGCATGAGTCAGACAGAGAGGATGGGTCTTCACACAGCACAGCAGTTCGCTGGAGATTTGCACAGCAGCTTGTTGGAGATGATATATTGTGAATGTTTTGCATCGGGAATATATTGTGAGGGTTGCAACTGTGTAAATTGTTTCAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCCAAAATTGCAAGCAGCCCTCATGGCACACGTGATAACCGGGAGGAGGCTGGGGAAGGTTTAATATTAGTAAAACATAACAAGGGGTGCCATTGTAAAAAATCTGGATGCCTGAAGAAGTATTGTGAATGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTTCATGGAGATCAAAATAACAACCTGACATATATTCAGCAAGCAGCAAATGCTGCCATAACTGGAGCTATTGGTGCCTCTGGCTATTCATCACCTCCAGTATCCAAGAAAAGAAAAGGTCAGGAACTCTTCTTTTGGCCTGCAGCCAAGGATCCAACAAATAGCAAGTTGGGACAACAGGTAAACCATGTCAGAGGTCCAGCTCCTTCCTCATCCTTGTCACCTGTGCCAGGTGCTCGTGTTGGAACTGCTACATTAGGTCCTTCGAAATTTATGTACAGGTCTCTTTTAGCAGACATTATACAACCACAGCACCTCAAGGAGCTTTGCTCAGTTCTGGTACTAGTATCTGGACAAGCTGCAAAGACACTTGCAGACCAGAAAAGTTCAATGGAAAAGCATACAGAAGATCAGATGGAAACTTCCCTTGCTTCTTCAACTCAAGAGCAGTTACCAACTCAAAAGGAGGGTGTTGTTGAGAAGGCTATAGCTGATGATTGTTCGAGTGCAAACCAAACAGATAAAATCAGCCCAGATAATTCCAGTTCAGATGGCGCTGATGTCCCGAAAGGGAGGCCAATGTCACCTGGGACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTTATGACAGCTGCCTCCCCTACTGGGCCAATGGTCCATGCTTGCAACACATCTTCGCAATTTCCTTATGGACAAGGAATGACAGAGGTCTACGCTGAGCAAGAAAGGATTGTACTAACAAAAAGTGAATTAGAGAGTCAAAAGGACCCAATCAGCTGTGGCATTGGAAATGCCAGTACTGAGTTGGTGCATCAGCAGGGGGCTGCTAGCAATGGTGTTAACAAAACTGTTGTTCCACCATTGGCCACAACTCCAGCATCTATGATCCCTGGTAATAATGTTGCTGAAAATGGGGAGACTAAACCGAAGGTCGAAAAAGAGATGTGA 1392 0.4418 MCMSQTERMGLHTAQQFAGDLHSSLLEMIYCECFASGIYCEGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDNREEAGEGLILVKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNLTYIQQAANAAITGAIGASGYSSPPVSKKRKGQELFFWPAAKDPTNSKLGQQVNHVRGPAPSSSLSPVPGARVGTATLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLADQKSSMEKHTEDQMETSLASSTQEQLPTQKEGVVEKAIADDCSSANQTDKISPDNSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPTGPMVHACNTSSQFPYGQGMTEVYAEQERIVLTKSELESQKDPISCGIGNASTELVHQQGAASNGVNKTVVPPLATTPASMIPGNNVAENGETKPKVEKEM 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi129g00043 463 MobiDBLite consensus disorder prediction 202 222 - -
Sebi129g00043 463 MobiDBLite consensus disorder prediction 437 463 - -
Sebi129g00043 463 MobiDBLite consensus disorder prediction 312 330 - -
Sebi129g00043 463 SMART CXC_2 99 140 IPR033467 -
Sebi129g00043 463 SMART CXC_2 30 54 IPR033467 -
Sebi129g00043 463 MobiDBLite consensus disorder prediction 286 300 - -
Sebi129g00043 463 ProSiteProfiles CRC domain profile. 19 139 IPR005172 -
Sebi129g00043 463 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 102 136 IPR005172 -
Sebi129g00043 463 MobiDBLite consensus disorder prediction 271 345 - -
Sebi129g00043 463 PANTHER TESMIN/TSO1-RELATED 29 396 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi129g00043 Sebi-Chr129 1805857 1811882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi129g00043 22 396 CPP Transcription Factor Family AT4G29000 62.599 6.69e-162 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sebi129g00043 TCR 2.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi129g00043 - - gmx:100777698 719.924