Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi129g00032 ATGAACCCTGAAGGGAGTGAGTGTGAGGTTGGGTTGGACAAGAGTTTTGGGTTCTCAAAGCTCTTCATTGCTCATTATGAGCTTGGACAAGAAGTGGGGCGTGGCCATTTTGGATACACTTGCTCTGGAAAGGGAAAGAAAGGCAGTTTCAAGGGCCATGATGTTGCTGTCAAACTCATTCCAAAATCCAAGATGACAACAACAATTGCTATAGAGGATGTAAGGAGTGAAGTAAAGATATTGCGAGCTCTAACTGGGCATAGGAATTTAGTGCAGTTCTATGAAGCCTATGAAGATGATGACAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGCAAACTGCTAGATAAGATTCTTTCCAGGGGTGGCAAGTACTCAGAAGAGGATGCCAGAGTTGTTTTGATTCAGATATTAAGTGTGGTAGCTTACTGTCATCTGCAGGGTGTTGTTCACCGTGATCTCAAGCCCGAGGTAATTAGCTCATAA 489 0.4274 MNPEGSECEVGLDKSFGFSKLFIAHYELGQEVGRGHFGYTCSGKGKKGSFKGHDVAVKLIPKSKMTTTIAIEDVRSEVKILRALTGHRNLVQFYEAYEDDDNVYIVMELCKGGKLLDKILSRGGKYSEEDARVVLIQILSVVAYCHLQGVVHRDLKPEVISS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi129g00032 162 Gene3D Transferase(Phosphotransferase) domain 1 19 160 - -
Sebi129g00032 162 PANTHER SERINE/THREONINE-PROTEIN KINASE 15 160 - -
Sebi129g00032 162 ProSiteProfiles Protein kinase domain profile. 26 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi129g00032 162 ProSitePatterns Protein kinases ATP-binding region signature. 32 58 IPR017441 GO:0005524
Sebi129g00032 162 Pfam Protein kinase domain 26 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi129g00032 162 SMART serkin_6 26 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi129g00032 162 SUPERFAMILY Protein kinase-like (PK-like) 16 158 IPR011009 -
Sebi129g00032 162 FunFam CDPK-related kinase 1 19 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi129g00032 Sebi-Chr129 1546063 1547595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi129g00032 3 158 EF-hand Containing Proteins AT3G50530 77.987 3.08e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi129g00032 Pkinase 3.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi129g00032 K13412 - qsa:O6P43_010056 283.878