Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi129g00016 ATGCCGCGACCAAATTCGGCCGTTCACCACCAACGTCAGAGCTCCGATAACTTCATCCTCGATGCAAACTATCACGGAAGATGGTTTCATCCTTCCACTTTCGCACAGGAGTTTGGGACTCGATCTTCGAGCTTGAGGAAGAACGACGACGATCGTGTGTTGACCAGTGGCTTGCTTGACCTGCATTCCTTCGATACTGAGCTTTTACCAGAGGGACAAAGTTTTGATGACTTTGAGCCGATTCTCTCCGGCAATAAACTTACGCAAAGGTCTCGGGGCTTTCCTGAGAGCCATGTCCTTAGAAGTTTCTCAACAGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTAGTGGTTCGGAAGAGACCGCTAAACAAGAAGGAAATAGCAAAGAAAGAGGAAGATATCATTACTATAGATTCAAATTGTCTCACAGTTCATGAAAGAAAACTCAAGGTTGACTTAACAGAATATGTTGAGAAACATGAGTTTTTTTTTGATGCTGTGCTGAATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTGGAGCCCATAGTCCCACTGGTTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGCCAAACTGGCAGTGGGAAGACCTATACTATGCAACCATTGCCTCTCAGAGCATCCCAACATATTTTAAGATTAATGCAACATACATACCGGAACCAAGGTTTCCAATTGTTTGTTAGTTTCTTTGAAATATATGGGGGGAAACTATTTGATCTCCTCAATGATCGAAAGAAACTTTGCATGAGGGAGGATGGGAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATACAGAGTATCTAAAGTTGAGACAATCAAAGAATTTATTGAGAAAGGAAATGCTACGAGAAGTACTGGTACAACTGGTGCAAATGAGGAATCCTCTCGATCACATGCTATACTTCAGCTTTGTATCAAGAGGTCAGCTGATGGGACTGAATCAAAGCCTGCTCGAGTTATAGGCAAACTATCTTTTATTGATCTGGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGATAAGCAGACTAGGATTGAAGGTGCTGAAATCAATAAAAGCTTACTTGCACTTAAAGAATGCATTAGAGCTTTAGACAATGATCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTACGAGACTCTTTTGTTGGTAACTCACGCACTGTAATGATATCATGCATTTCGCCAAGCTCTGGTTCATGTGAGCATACTCTCAACACATTAAGATATGCTGACAGAGTGAAGAGCCTGTCAAGGGGGAACAGCTCCAGAAGGGATCCCCTTTCTTCTTCAAACCTTAGAGACTCAACTGTATTGCCTGGGTCTTCAGTTATATCTCAAGATGATACCTTTGAGGATGAAATAACATATGTTTCCAGCGAGAGGAATCAATTTGGTTGGTCCAAACAGCTTGAAAGAGAACCCTCTCCTCCAATTAATGTGGACCCTGTTCCAAGTGGCAGGATGGGGGGAAATTTGGCACCATCTTTGTATTCTGACCCACAAAAGGGTCAAAGAGGTAGTCAAAATGACAGGGCTGACACTGAAAATCATTACCTAGGGCCAACATATGAACAAGACAGAACAAGACAATCGAGTAAGAGGGTGGATAACAACCAATCATTTGCTATGGAGAACAAGAGGAAGATAGAATCTCGTGTTAAACATATAGATCTATCACATGTTGAGACTAATCATTTTGATCCTGATGTTGATTTAAATGCCCTGCTGAAGGAAGAGGAAGATCTTGTAACTGCTCACCGGAGACAAGTGGAGGAAACAATAGACATTGTTAGGGAGGAGATGAATTTACTCGTTGAAGCTGACCAACCAGGAAATCAACTGGATGATTATATTTCCAAATTGAATGCCATTTTGTCACAAAAGGCTGCAGGAATCTTTCAATTGCAGACGCAGTTGGCTCAATTTCAGAGACGTTTAAATGAGTATAATGTTTTCGTTTCTTCAGAAATAGGAATCAATTCAGTCTCTGCTCTACATTTTATTCCTCAGACGAGTCACTACTGTGACTTGAACTGA 2103 0.4132 MPRPNSAVHHQRQSSDNFILDANYHGRWFHPSTFAQEFGTRSSSLRKNDDDRVLTSGLLDLHSFDTELLPEGQSFDDFEPILSGNKLTQRSRGFPESHVLRSFSTDKERANNVAKIKVVVRKRPLNKKEIAKKEEDIITIDSNCLTVHERKLKVDLTEYVEKHEFFFDAVLNEDVSNDEVYAETVEPIVPLVFQRTKATCFAYGQTGSGKTYTMQPLPLRASQHILRLMQHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSKVETIKEFIEKGNATRSTGTTGANEESSRSHAILQLCIKRSADGTESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSRGNSSRRDPLSSSNLRDSTVLPGSSVISQDDTFEDEITYVSSERNQFGWSKQLEREPSPPINVDPVPSGRMGGNLAPSLYSDPQKGQRGSQNDRADTENHYLGPTYEQDRTRQSSKRVDNNQSFAMENKRKIESRVKHIDLSHVETNHFDPDVDLNALLKEEEDLVTAHRRQVEETIDIVREEMNLLVEADQPGNQLDDYISKLNAILSQKAAGIFQLQTQLAQFQRRLNEYNVFVSSEIGINSVSALHFIPQTSHYCDLN 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi129g00016 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 438 IPR027417 -
Sebi129g00016 700 ProSiteProfiles Kinesin motor domain profile. 115 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi129g00016 700 ProSitePatterns Kinesin motor domain signature. 337 348 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sebi129g00016 700 MobiDBLite consensus disorder prediction 487 564 - -
Sebi129g00016 700 MobiDBLite consensus disorder prediction 437 466 - -
Sebi129g00016 700 FunFam Kinesin-like protein 97 441 - -
Sebi129g00016 700 Gene3D Kinesin motor domain 96 440 IPR036961 -
Sebi129g00016 700 PANTHER KINESIN-RELATED PROTEIN 6 30 673 IPR027640 GO:0003777|GO:0007018
Sebi129g00016 700 PRINTS Kinesin heavy chain signature 388 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi129g00016 700 PRINTS Kinesin heavy chain signature 195 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi129g00016 700 PRINTS Kinesin heavy chain signature 304 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi129g00016 700 PRINTS Kinesin heavy chain signature 338 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi129g00016 700 SMART kinesin_4 113 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi129g00016 700 Coils Coil 609 629 - -
Sebi129g00016 700 MobiDBLite consensus disorder prediction 442 466 - -
Sebi129g00016 700 Pfam Kinesin motor domain 121 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi129g00016 700 CDD KISc_KIF2_like 115 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi129g00016 Sebi-Chr129 748789 755464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi129g00016 82 438 Calmodulin-binding Proteins AT5G65930 33.423 2.79e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi129g00016 K10393 - gmx:100775562 1170.61