Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi128g00089 ATGGCGGAAGAACATCGATGCGAAGCTCCCGAAGGCCACCGACTCTGCGCCAACAACTGCGGCTTCCTCGGTAGCCCAGCCACCATGAATCTCTGCTCCAAATGCTACGGTGACATACGTTTGAAGGAACAAGAAGAAGCATCTACCAAATCCACCATTGAAACCGCTCTCTCTTCTGCCTCCTCCTCCGTCGCGTCGGCGGCGGCGGCTATCGCATCGCCGCCGCCGTCCACGTCATCTCCGTCGACGGCTGCTGTTGAATCAGTCAAATCTCTCCCTCCTCCGGCGGCGTTGACGGAGGTCGCGTCGAGCTCTGTGGCTGCTCCTCCGGTTCAACCGAACCGGTACCCGGAGAGGCACGCGTGCAGCTTCGACTTTAAGACGGTGGGACGAGAGGAAATTGCTCGGGCAAACCCTATGATCAGAGCGGAGAAGCTGCAGAGGATTTGA 450 0.5889 MAEEHRCEAPEGHRLCANNCGFLGSPATMNLCSKCYGDIRLKEQEEASTKSTIETALSSASSSVASAAAAIASPPPSTSSPSTAAVESVKSLPPPAALTEVASSSVAAPPVQPNRYPERHACSFDFKTVGREEIARANPMIRAEKLQRI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi128g00089 149 MobiDBLite consensus disorder prediction 64 87 - -
Sebi128g00089 149 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 63 - -
Sebi128g00089 149 MobiDBLite consensus disorder prediction 64 91 - -
Sebi128g00089 149 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 77 - -
Sebi128g00089 149 Gene3D - 112 145 IPR035896 -
Sebi128g00089 149 SUPERFAMILY AN1-like Zinc finger 115 144 IPR035896 -
Sebi128g00089 149 Gene3D - 1 84 - -
Sebi128g00089 149 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Sebi128g00089 149 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Sebi128g00089 149 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi128g00089 Sebi-Chr128 1508163 1508690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi128g00089 1 149 C2H2 Transcription Factor Family AT3G52800 44.706 4.63e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi128g00089 - - lang:109347531 164.851